Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 Y_RNA.333-201ENST00000365274 102 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 MIR9-1-201ENST00000385198 89 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AL162578.1-201ENST00000406202 378 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 SNORA11-201ENST00000408789 128 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 RNU4-72P-201ENST00000410754 173 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AL512504.1-201ENST00000415494 778 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 RPL7P44-201ENST00000424827 742 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AL513175.1-201ENST00000431492 780 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AC000041.1-201ENST00000439655 175 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AL445687.1-201ENST00000439946 251 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AL139109.1-201ENST00000455491 297 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 FAM172BP-201ENST00000487497 1089 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 MIR4658-201ENST00000584344 65 ntBASIC1.92□□□□□ -2.1
HIST1H1AQ02539 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
HIST1H1AQ02539 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC009902.3-201ENST00000606235 2172 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 ZNF833P-201ENST00000424938 1494 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 SNORA6-201ENST00000384033 151 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 SNORA48.2-201ENST00000390926 124 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 DHFRP5-201ENST00000406944 564 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC008280.1-201ENST00000418851 412 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 CYCSP32-201ENST00000440548 321 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 IFNA11P-201ENST00000446352 526 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AL031659.1-201ENST00000447075 539 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AL627224.1-201ENST00000448334 444 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 C1DP3-201ENST00000455013 423 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC008280.2-201ENST00000455473 307 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AL359385.1-201ENST00000456509 365 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 PRELID3BP4-201ENST00000515476 571 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 NDUFS5P6-201ENST00000529136 295 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC068339.2-201ENST00000534395 618 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AP001002.2-201ENST00000625137 386 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 CYP3A51P-201ENST00000633513 256 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
HIST1H1AQ02539 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HIST1H1AQ02539 AC022336.2-201ENST00000568966 2538 ntBASIC1.9□□□□□ -2.1
HIST1H1AQ02539 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC009812.4-201ENST00000569134 1805 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 RNU6-1249P-201ENST00000363237 111 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 RNU6-7-201ENST00000364784 107 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 RNU6-8-201ENST00000365467 107 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 RNU6-339P-201ENST00000384310 107 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 U3.29-201ENST00000391296 212 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL360182.1-201ENST00000397433 468 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 ARL5AP4-201ENST00000430731 512 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 RPL23AP15-201ENST00000450202 459 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 SNORD109B-201ENST00000458961 67 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 SNORD109A-201ENST00000459128 67 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC026801.2-201ENST00000515352 425 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 RNA5SP282-201ENST00000516355 108 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 TRAV28-201ENST00000557548 323 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms