Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 BX276092.3-201ENST00000424182 230 ntBASIC2.01□□□□□ -2.09
UBA52P62987 RPS24P8-201ENST00000431490 402 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AL139415.2-201ENST00000431968 163 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.01□□□□□ -2.09
UBA52P62987 AC079804.2-201ENST00000490376 200 ntBASIC2.01□□□□□ -2.09
UBA52P62987 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.01□□□□□ -2.09
UBA52P62987 RN7SL636P-201ENST00000497504 294 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AC008837.1-201ENST00000511513 412 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.01□□□□□ -2.09
UBA52P62987 CIR1P1-201ENST00000524055 1133 ntBASIC2.01□□□□□ -2.09
UBA52P62987 SUB1P1-201ENST00000524415 382 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AC019227.1-201ENST00000526902 510 ntBASIC2.01□□□□□ -2.09
UBA52P62987 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.01□□□□□ -2.09
UBA52P62987 AL590282.1-201ENST00000610379 1136 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.01□□□□□ -2.09
UBA52P62987 AC244517.1-201ENST00000606030 2086 ntBASIC2.01□□□□□ -2.09
UBA52P62987 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBA52P62987 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
UBA52P62987 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
UBA52P62987 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
UBA52P62987 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
UBA52P62987 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UBA52P62987 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2□□□□□ -2.09
UBA52P62987 RNA5SP456-201ENST00000364002 114 ntBASIC2□□□□□ -2.09
UBA52P62987 SNORD114-30-201ENST00000364448 72 ntBASIC2□□□□□ -2.09
UBA52P62987 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2□□□□□ -2.09
UBA52P62987 MIR627-201ENST00000384979 97 ntBASIC2□□□□□ -2.09
UBA52P62987 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
UBA52P62987 HMGB3P2-201ENST00000411913 584 ntBASIC2□□□□□ -2.09
UBA52P62987 MTND4P11-201ENST00000417020 1058 ntBASIC2□□□□□ -2.09
UBA52P62987 AC003685.2-201ENST00000422795 395 ntBASIC2□□□□□ -2.09
UBA52P62987 SRIP2-201ENST00000428470 166 ntBASIC2□□□□□ -2.09
UBA52P62987 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
UBA52P62987 AC104389.3-201ENST00000445629 235 ntBASIC2□□□□□ -2.09
UBA52P62987 AC011753.1-201ENST00000451001 220 ntBASIC2□□□□□ -2.09
UBA52P62987 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2□□□□□ -2.09
UBA52P62987 Y_RNA.638-201ENST00000459374 113 ntBASIC2□□□□□ -2.09
UBA52P62987 RPL23AP45-201ENST00000476406 468 ntBASIC2□□□□□ -2.09
UBA52P62987 RBM43P1-201ENST00000476891 1081 ntBASIC2□□□□□ -2.09
UBA52P62987 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
UBA52P62987 AC234781.5-201ENST00000508429 271 ntBASIC2□□□□□ -2.09
UBA52P62987 OR5AK3P-201ENST00000527486 1297 ntBASIC2□□□□□ -2.09
UBA52P62987 AC109635.4-202ENST00000531666 412 ntBASIC2□□□□□ -2.09
UBA52P62987 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2□□□□□ -2.09
UBA52P62987 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2□□□□□ -2.09
UBA52P62987 RPL23AP84-201ENST00000571193 464 ntBASIC2□□□□□ -2.09
UBA52P62987 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2□□□□□ -2.09
UBA52P62987 AC009220.3-201ENST00000604318 586 ntBASIC2□□□□□ -2.09
UBA52P62987 AC112503.2-201ENST00000609005 552 ntBASIC2□□□□□ -2.09
UBA52P62987 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
UBA52P62987 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2□□□□□ -2.09
UBA52P62987 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2□□□□□ -2.09
UBA52P62987 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2□□□□□ -2.09
UBA52P62987 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBA52P62987 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.99□□□□□ -2.09
UBA52P62987 MIR320B1-201ENST00000390209 79 ntBASIC1.99□□□□□ -2.09
UBA52P62987 NANOGP5-201ENST00000424456 877 ntBASIC1.99□□□□□ -2.09
UBA52P62987 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBA52P62987 MTCO1P39-201ENST00000426148 480 ntBASIC1.99□□□□□ -2.09
UBA52P62987 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.99□□□□□ -2.09
UBA52P62987 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.99□□□□□ -2.09
UBA52P62987 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.99□□□□□ -2.09
UBA52P62987 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBA52P62987 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.99□□□□□ -2.09
UBA52P62987 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBA52P62987 AC022884.3-201ENST00000579571 248 ntBASIC1.99□□□□□ -2.09
UBA52P62987 AC092159.4-201ENST00000624944 550 ntBASIC1.99□□□□□ -2.09
UBA52P62987 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UBA52P62987 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.99□□□□□ -2.09
UBA52P62987 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBA52P62987 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
UBA52P62987 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBA52P62987 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBA52P62987 RNU1-73P-201ENST00000383971 164 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AL359511.1-201ENST00000402970 211 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AL158825.1-201ENST00000414735 521 ntBASIC1.98□□□□□ -2.09
UBA52P62987 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
UBA52P62987 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBA52P62987 AC023347.2-201ENST00000433994 462 ntBASIC1.98□□□□□ -2.09
UBA52P62987 FAM103A2P-201ENST00000444122 354 ntBASIC1.98□□□□□ -2.09
UBA52P62987 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
UBA52P62987 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.98□□□□□ -2.09
UBA52P62987 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBA52P62987 GAPDHP39-201ENST00000481866 979 ntBASIC1.98□□□□□ -2.09
UBA52P62987 MRPL42P6-201ENST00000486397 371 ntBASIC1.98□□□□□ -2.09
UBA52P62987 GZMAP1-201ENST00000503054 631 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AC092436.1-201ENST00000506450 503 ntBASIC1.98□□□□□ -2.09
UBA52P62987 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBA52P62987 AC022690.1-201ENST00000526681 550 ntBASIC1.98□□□□□ -2.09
UBA52P62987 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.98□□□□□ -2.09
UBA52P62987 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.98□□□□□ -2.09
UBA52P62987 AP000889.2-201ENST00000532684 490 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AC069304.3-201ENST00000603938 1084 ntBASIC1.98□□□□□ -2.09
UBA52P62987 NUTF2P8-201ENST00000604593 363 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AL121917.1-203ENST00000605534 577 ntBASIC1.98□□□□□ -2.09
UBA52P62987 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.98□□□□□ -2.09
UBA52P62987 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms