Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL136380.1-201ENST00000447970 162 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AP1S2P1-201ENST00000457344 379 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.94□□□□□ -1.62
HERVK_113P62684 AC108022.1-201ENST00000493466 478 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.94□□□□□ -1.62
HERVK_113P62684 AC010587.1-201ENST00000505809 469 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HERVK_113P62684 TXNP6-201ENST00000510190 310 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.94□□□□□ -1.62
HERVK_113P62684 HMGB1P19-201ENST00000517578 577 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AF235103.2-201ENST00000525753 346 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.94□□□□□ -1.62
HERVK_113P62684 MIR4444-1-201ENST00000581696 74 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 MIR4444-2-201ENST00000584390 74 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.94□□□□□ -1.62
HERVK_113P62684 AL353997.4-201ENST00000586196 166 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.94□□□□□ -1.62
HERVK_113P62684 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.94□□□□□ -1.62
HERVK_113P62684 HMGB2P1-201ENST00000591146 634 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC068790.5-201ENST00000602741 355 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AL162413.1-201ENST00000603198 110 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AL009028.1-201ENST00000604895 802 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC010201.1-201ENST00000605051 540 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AL158211.4-201ENST00000606988 584 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC123768.4-201ENST00000616244 701 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 AC009318.4-201ENST00000620496 486 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.94□□□□□ -1.62
HERVK_113P62684 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERVK_113P62684 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HERVK_113P62684 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERVK_113P62684 NUP58P1-201ENST00000502546 1738 ntBASIC4.94□□□□□ -1.62
HERVK_113P62684 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HERVK_113P62684 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HERVK_113P62684 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HERVK_113P62684 AC092447.10-201ENST00000620607 1652 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AL118496.1-201ENST00000440201 1812 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERVK_113P62684 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.93□□□□□ -1.62
HERVK_113P62684 AC011155.1-201ENST00000316512 456 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 RNU6-1243P-201ENST00000364028 107 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 Y_RNA.813-201ENST00000364639 102 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 SNORA62.3-201ENST00000365110 153 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 SNORA20.2-201ENST00000383922 131 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 RNU6-146P-201ENST00000384602 108 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 MIR670-201ENST00000390142 98 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 RN7SKP159-201ENST00000410657 292 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 SNORA74C-2-201ENST00000411179 201 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 OR51AB1P-201ENST00000429046 620 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 RPL23AP25-201ENST00000430973 463 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 RPL23AP81-201ENST00000455252 467 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 RPL23AP65-201ENST00000475608 468 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 MTCYBP18-201ENST00000501056 747 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.93□□□□□ -1.62
HERVK_113P62684 NPM1P41-201ENST00000512920 831 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.93□□□□□ -1.62
HERVK_113P62684 DYNLL1P4-201ENST00000549314 266 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 HIF1AP1-201ENST00000553642 175 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.93□□□□□ -1.62
HERVK_113P62684 AC009101.1-201ENST00000568135 242 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 MIR3118-1-201ENST00000581787 76 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.93□□□□□ -1.62
HERVK_113P62684 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.93□□□□□ -1.62
HERVK_113P62684 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.93□□□□□ -1.62
HERVK_113P62684 RPL23AP92-201ENST00000603609 255 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC007621.1-201ENST00000604544 437 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AL160290.3-201ENST00000604869 165 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC012150.2-201ENST00000621300 544 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC091953.2-201ENST00000623979 160 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 AC055839.1-201ENST00000634467 498 ntBASIC4.93□□□□□ -1.62
HERVK_113P62684 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HERVK_113P62684 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.93□□□□□ -1.62
HERVK_113P62684 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.93□□□□□ -1.62
HERVK_113P62684 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HERVK_113P62684 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERVK_113P62684 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERVK_113P62684 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HERVK_113P62684 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 MAPK10-286ENST00000641208 8747 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HERVK_113P62684 RNA5SP307-201ENST00000362863 116 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 Y_RNA.159-201ENST00000363674 87 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 RPL31P52-201ENST00000407532 367 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HERVK_113P62684 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.92□□□□□ -1.62
HERVK_113P62684 RPS20P1-201ENST00000434853 354 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.92□□□□□ -1.62
HERVK_113P62684 RPS29P7-201ENST00000439662 171 ntBASIC4.92□□□□□ -1.62
HERVK_113P62684 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.92□□□□□ -1.62
HERVK_113P62684 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.92□□□□□ -1.62
HERVK_113P62684 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms