Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNORA11C-201ENST00000408532 129 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 RNU6-920P-201ENST00000410926 92 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 NPM1P11-201ENST00000417106 855 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 AC007560.1-201ENST00000426912 237 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 AC005300.1-201ENST00000428401 373 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 ARL4AP4-201ENST00000434170 518 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 ARF4P4-201ENST00000439608 520 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 WASF1P1-201ENST00000447560 1131 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 NANOGNBP1-201ENST00000448444 480 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.85□□□□□ -2.11
CKS1BP61024 PNPLA4P1-201ENST00000458328 305 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 RN7SL807P-201ENST00000470923 297 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 AC008885.2-201ENST00000509506 930 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AC008885.1-201ENST00000514930 301 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.85□□□□□ -2.11
CKS1BP61024 AP003102.1-201ENST00000525638 661 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 PSMA2P1-201ENST00000526365 646 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 CYCSP26-201ENST00000534107 320 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AL355836.1-201ENST00000555951 870 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.85□□□□□ -2.11
CKS1BP61024 AC090888.1-201ENST00000561335 1141 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 EIF5A2P1-201ENST00000564027 460 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 AC008739.3-201ENST00000603262 127 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 APOOP1-201ENST00000604695 592 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AL513477.2-201ENST00000607858 568 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AC107214.2-201ENST00000608204 634 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 AL449363.1-201ENST00000617815 186 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.85□□□□□ -2.11
CKS1BP61024 AP006248.3-201ENST00000623580 594 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CKS1BP61024 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.85□□□□□ -2.11
CKS1BP61024 U6.105-201ENST00000637379 88 ntBASIC1.85□□□□□ -2.11
CKS1BP61024 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.85□□□□□ -2.11
CKS1BP61024 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CKS1BP61024 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CKS1BP61024 AC096644.4-201ENST00000563417 2912 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 CENPCP1-201ENST00000533085 2578 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC016716.1-201ENST00000265882 708 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 MIR183-201ENST00000384958 110 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 SEPT2P1-201ENST00000419651 180 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AL158156.1-201ENST00000422509 473 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC098614.2-201ENST00000426040 255 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC097499.1-201ENST00000444277 208 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CKS1BP61024 MTND2P19-201ENST00000449129 1012 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 RPS15AP27-201ENST00000449183 343 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC128713.1-201ENST00000471495 306 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC126182.1-201ENST00000478134 357 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 SAP18P1-201ENST00000512058 390 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 RN7SKP57-201ENST00000517248 293 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC087241.2-201ENST00000535801 324 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.84□□□□□ -2.11
CKS1BP61024 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC011260.1-201ENST00000578420 472 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.84□□□□□ -2.11
CKS1BP61024 AC002487.1-201ENST00000604565 994 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 MIR7112-201ENST00000616126 65 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AC084757.4-201ENST00000616350 526 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 MIR7975-201ENST00000619350 68 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CKS1BP61024 AC026422.1-201ENST00000623961 452 ntBASIC1.84□□□□□ -2.11
CKS1BP61024 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.84□□□□□ -2.11
CKS1BP61024 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.84□□□□□ -2.11
CKS1BP61024 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CKS1BP61024 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.84□□□□□ -2.12
CKS1BP61024 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CKS1BP61024 ZNF658B-202ENST00000615961 3375 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CKS1BP61024 RPL21P132-201ENST00000331267 462 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CKS1BP61024 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AL138885.1-201ENST00000405921 675 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.83□□□□□ -2.12
CKS1BP61024 RPL7P8-201ENST00000411964 730 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 RPS20P25-201ENST00000412447 352 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CKS1BP61024 FNDC3CP-201ENST00000420795 1155 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.83□□□□□ -2.12
CKS1BP61024 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.83□□□□□ -2.12
CKS1BP61024 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.83□□□□□ -2.12
CKS1BP61024 AC004022.1-201ENST00000447766 1066 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 PSPHP1-201ENST00000450062 261 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
CKS1BP61024 ANKRD26P4-201ENST00000455755 950 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms