Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL589880.1-201ENST00000448271 287 ntBASIC3.32□□□□□ -1.88
SRP54P61011 MRPS31P2-201ENST00000451581 518 ntBASIC3.32□□□□□ -1.88
SRP54P61011 HSFY5P-201ENST00000453726 309 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AC104164.3-201ENST00000467363 1258 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
SRP54P61011 MTND4LP22-201ENST00000508209 276 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AC008837.2-201ENST00000513076 418 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP54P61011 AC022861.1-201ENST00000522981 663 ntBASIC3.32□□□□□ -1.88
SRP54P61011 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRP54P61011 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
SRP54P61011 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.32□□□□□ -1.88
SRP54P61011 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP54P61011 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP54P61011 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP54P61011 MTCYBP23-201ENST00000558717 1102 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AL606834.2-201ENST00000602954 668 ntBASIC3.32□□□□□ -1.88
SRP54P61011 BNIP3P11-201ENST00000603878 563 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AL031176.1-201ENST00000604554 466 ntBASIC3.32□□□□□ -1.88
SRP54P61011 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.32□□□□□ -1.88
SRP54P61011 ZNF807-201ENST00000328088 1707 ntBASIC3.32□□□□□ -1.88
SRP54P61011 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SRP54P61011 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 AL513302.2-201ENST00000562313 1842 ntBASIC3.31□□□□□ -1.88
SRP54P61011 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP54P61011 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP54P61011 DHFRP6-201ENST00000401776 268 ntBASIC3.31□□□□□ -1.88
SRP54P61011 HMGN1P24-201ENST00000412282 298 ntBASIC3.31□□□□□ -1.88
SRP54P61011 Z99755.1-201ENST00000414048 380 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP54P61011 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP54P61011 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP54P61011 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 USP9YP11-201ENST00000427537 717 ntBASIC3.31□□□□□ -1.88
SRP54P61011 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
SRP54P61011 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SRP54P61011 AC091862.1-201ENST00000438016 1100 ntBASIC3.31□□□□□ -1.88
SRP54P61011 SDR42E1P3-201ENST00000438345 502 ntBASIC3.31□□□□□ -1.88
SRP54P61011 EEF1A1P39-201ENST00000440791 250 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AL121871.1-201ENST00000443413 436 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP54P61011 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.31□□□□□ -1.88
SRP54P61011 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP54P61011 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC023424.2-201ENST00000493479 777 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC021678.1-201ENST00000505195 936 ntBASIC3.31□□□□□ -1.88
SRP54P61011 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 OR10V3P-201ENST00000525712 725 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 AC011602.1-201ENST00000546484 331 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP54P61011 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP54P61011 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AL162713.1-201ENST00000604480 262 ntBASIC3.31□□□□□ -1.88
SRP54P61011 YPEL5P2-201ENST00000605553 359 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC012443.1-201ENST00000605605 231 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC106028.5-201ENST00000610332 395 ntBASIC3.31□□□□□ -1.88
SRP54P61011 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
SRP54P61011 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 AL596245.1-201ENST00000618994 362 ntBASIC3.31□□□□□ -1.88
SRP54P61011 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
SRP54P61011 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP54P61011 AP001002.2-201ENST00000625137 386 ntBASIC3.31□□□□□ -1.88
SRP54P61011 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP54P61011 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRP54P61011 AL079343.1-201ENST00000572358 1771 ntBASIC3.3□□□□□ -1.88
SRP54P61011 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRP54P61011 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SRP54P61011 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRP54P61011 RNU6-925P-201ENST00000384629 104 ntBASIC3.3□□□□□ -1.88
SRP54P61011 RNU6-882P-201ENST00000391025 103 ntBASIC3.3□□□□□ -1.88
SRP54P61011 ERHP2-201ENST00000402323 299 ntBASIC3.3□□□□□ -1.88
SRP54P61011 RNU2-47P-201ENST00000410649 186 ntBASIC3.3□□□□□ -1.88
SRP54P61011 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP54P61011 HMGB3P23-201ENST00000414981 585 ntBASIC3.3□□□□□ -1.88
SRP54P61011 NDUFB4P5-201ENST00000415445 361 ntBASIC3.3□□□□□ -1.88
SRP54P61011 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.3□□□□□ -1.88
SRP54P61011 MTCO2P5-201ENST00000422621 426 ntBASIC3.3□□□□□ -1.88
SRP54P61011 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP54P61011 AC006028.1-201ENST00000438379 402 ntBASIC3.3□□□□□ -1.88
SRP54P61011 EXOSC3P1-201ENST00000448649 500 ntBASIC3.3□□□□□ -1.88
SRP54P61011 ARPC3P5-201ENST00000448802 534 ntBASIC3.3□□□□□ -1.88
SRP54P61011 AC097262.1-201ENST00000452559 548 ntBASIC3.3□□□□□ -1.88
SRP54P61011 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP54P61011 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.3□□□□□ -1.88
SRP54P61011 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
SRP54P61011 RPL7P38-201ENST00000488396 739 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms