Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN6P56747 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN6P56747 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN6P56747 MAPK10-362ENST00000641864 4484 ntBASIC2.77□□□□□ -1.97
CLDN6P56747 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
CLDN6P56747 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN6P56747 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN6P56747 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN6P56747 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN6P56747 AL589826.1-201ENST00000340697 249 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN6P56747 SNORA46-201ENST00000384762 135 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN6P56747 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN6P56747 AC099677.1-201ENST00000420575 175 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN6P56747 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN6P56747 UBE2V1P6-201ENST00000430840 422 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 MTCYBP34-201ENST00000439552 670 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 HSPE1P28-201ENST00000443139 211 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AL513124.1-201ENST00000450410 614 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 NIPA2P5-201ENST00000452282 464 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 RNA5SP310-201ENST00000459084 116 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN6P56747 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN6P56747 AC048346.1-201ENST00000510247 144 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN6P56747 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN6P56747 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN6P56747 FAM60BP-201ENST00000578364 658 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AC096947.1-201ENST00000603233 470 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AC055876.5-201ENST00000605667 259 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 AC004832.5-201ENST00000608677 401 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 AL163152.1-201ENST00000642001 374 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 NUP58P1-201ENST00000502546 1738 ntBASIC2.76□□□□□ -1.97
CLDN6P56747 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN6P56747 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN6P56747 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CLDN6P56747 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CLDN6P56747 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN6P56747 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN6P56747 OR1L1-202ENST00000373686 1083 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN6P56747 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CLDN6P56747 AL360182.1-201ENST00000397433 468 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 TMSB4XP8-201ENST00000402089 135 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 MTCO2P31-201ENST00000402702 684 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AL139098.1-201ENST00000407291 389 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
CLDN6P56747 AL133384.1-201ENST00000412744 351 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AC092447.6-201ENST00000414578 210 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 TMSB4XP6-201ENST00000415187 135 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AC245054.2-201ENST00000415639 319 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 SSXP9-201ENST00000417503 292 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 TMSB4XP1-201ENST00000424567 135 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 DPPA2P1-201ENST00000428060 556 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CLDN6P56747 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN6P56747 AC009969.1-201ENST00000438726 172 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AL645638.1-201ENST00000440519 361 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 RPS12P18-201ENST00000442381 270 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 GXYLT1P1-201ENST00000446657 490 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AL162389.1-201ENST00000449233 177 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN6P56747 AC093392.2-201ENST00000450682 337 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 UQCRHP3-201ENST00000451503 251 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 Y_RNA.638-201ENST00000459374 113 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 RN7SL75P-201ENST00000461926 281 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 RPS17P11-201ENST00000474297 293 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AC112518.2-201ENST00000508565 425 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 SNORA31.1-201ENST00000515993 133 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 SNORA31.5-201ENST00000516190 133 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 ARL2BPP5-201ENST00000523141 481 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AC018630.1-201ENST00000541376 925 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN6P56747 AC079148.1-201ENST00000565944 819 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 AL354696.1-201ENST00000614652 497 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN6P56747 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN6P56747 ZNF663P-202ENST00000641770 1131 ntBASIC2.75□□□□□ -1.97
CLDN6P56747 ZNF849P-201ENST00000594711 1566 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 AL136520.1-201ENST00000600311 1322 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN6P56747 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN6P56747 U3.29-201ENST00000391296 212 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 AP002784.2-201ENST00000397300 549 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 RSL24D1P4-201ENST00000400938 484 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 CYCSP45-201ENST00000402289 315 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 U3.42-201ENST00000408746 214 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 RNA5SP38-201ENST00000410750 119 ntBASIC2.74□□□□□ -1.97
CLDN6P56747 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms