Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NEK3P51956 AC002546.1-201ENST00000588041 2504 ntBASIC4.3□□□□□ -1.72
NEK3P51956 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 RNU6-278P-201ENST00000390945 109 ntBASIC4.3□□□□□ -1.72
NEK3P51956 FCF1P10-201ENST00000407590 479 ntBASIC4.3□□□□□ -1.72
NEK3P51956 RN7SKP142-201ENST00000411236 328 ntBASIC4.3□□□□□ -1.72
NEK3P51956 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
NEK3P51956 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC006366.1-201ENST00000422002 759 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.3□□□□□ -1.72
NEK3P51956 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 MTND4P32-201ENST00000437189 1237 ntBASIC4.3□□□□□ -1.72
NEK3P51956 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEK3P51956 RPL26P6-201ENST00000440913 438 ntBASIC4.3□□□□□ -1.72
NEK3P51956 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.3□□□□□ -1.72
NEK3P51956 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 RPL23AP81-201ENST00000455252 467 ntBASIC4.3□□□□□ -1.72
NEK3P51956 RPL36AP13-201ENST00000457490 317 ntBASIC4.3□□□□□ -1.72
NEK3P51956 RPL7P15-201ENST00000461190 712 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEK3P51956 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.3□□□□□ -1.72
NEK3P51956 AL359273.1-201ENST00000510918 627 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.3□□□□□ -1.72
NEK3P51956 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.3□□□□□ -1.72
NEK3P51956 RN7SKP21-201ENST00000516503 220 ntBASIC4.3□□□□□ -1.72
NEK3P51956 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.3□□□□□ -1.72
NEK3P51956 SNORA31.22-201ENST00000517204 135 ntBASIC4.3□□□□□ -1.72
NEK3P51956 MIR2116-201ENST00000517221 80 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AP002748.2-201ENST00000528671 348 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEK3P51956 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.3□□□□□ -1.72
NEK3P51956 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.3□□□□□ -1.72
NEK3P51956 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.3□□□□□ -1.72
NEK3P51956 AP005205.1-201ENST00000563503 508 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.3□□□□□ -1.72
NEK3P51956 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.3□□□□□ -1.72
NEK3P51956 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 AC105224.1-201ENST00000587055 421 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AP001981.2-201ENST00000603241 418 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AL161729.3-201ENST00000603533 673 ntBASIC4.3□□□□□ -1.72
NEK3P51956 BX664608.1-201ENST00000610519 487 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC093783.1-201ENST00000612976 329 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC008121.2-201ENST00000614647 523 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AL139089.1-201ENST00000620372 975 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AL359715.5-201ENST00000623431 443 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AC095031.1-201ENST00000623685 672 ntBASIC4.3□□□□□ -1.72
NEK3P51956 AL603839.4-201ENST00000624658 1005 ntBASIC4.3□□□□□ -1.72
NEK3P51956 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NEK3P51956 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEK3P51956 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.3□□□□□ -1.72
NEK3P51956 AL390237.1-201ENST00000404226 1415 ntBASIC4.29□□□□□ -1.72
NEK3P51956 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 Y_RNA.201-201ENST00000364052 96 ntBASIC4.29□□□□□ -1.72
NEK3P51956 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NEK3P51956 AL022722.2-201ENST00000402519 180 ntBASIC4.29□□□□□ -1.72
NEK3P51956 RNU2-62P-201ENST00000410868 191 ntBASIC4.29□□□□□ -1.72
NEK3P51956 HMGN1P14-201ENST00000412459 517 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.29□□□□□ -1.72
NEK3P51956 USP9YP13-201ENST00000417797 480 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AL161631.1-201ENST00000417933 486 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.29□□□□□ -1.72
NEK3P51956 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 TAF9P1-201ENST00000445421 515 ntBASIC4.29□□□□□ -1.72
NEK3P51956 MTND1P29-201ENST00000448112 647 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.29□□□□□ -1.72
NEK3P51956 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.29□□□□□ -1.72
NEK3P51956 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.29□□□□□ -1.72
NEK3P51956 AL033528.1-201ENST00000453780 140 ntBASIC4.29□□□□□ -1.72
NEK3P51956 TAF9P2-201ENST00000454958 515 ntBASIC4.29□□□□□ -1.72
NEK3P51956 HMGN2P7-201ENST00000456186 273 ntBASIC4.29□□□□□ -1.72
NEK3P51956 MTCO2P18-201ENST00000457151 658 ntBASIC4.29□□□□□ -1.72
NEK3P51956 RNU6-956P-201ENST00000458868 103 ntBASIC4.29□□□□□ -1.72
NEK3P51956 SNORD42A-201ENST00000459584 64 ntBASIC4.29□□□□□ -1.72
NEK3P51956 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
NEK3P51956 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.29□□□□□ -1.72
NEK3P51956 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEK3P51956 RPS27AP13-201ENST00000498403 237 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 FTH1P21-201ENST00000512179 511 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.29□□□□□ -1.72
NEK3P51956 RNU1-61P-201ENST00000516107 151 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC100870.1-201ENST00000522035 505 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.29□□□□□ -1.72
NEK3P51956 CBX3P5-201ENST00000552017 521 ntBASIC4.29□□□□□ -1.72
NEK3P51956 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.29□□□□□ -1.72
NEK3P51956 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.29□□□□□ -1.72
NEK3P51956 AC007224.1-201ENST00000564410 144 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms