Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 TMEM251P1-201ENST00000503717 318 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.19□□□□□ -1.74
CTCFP49711 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CTCFP49711 AC008802.1-201ENST00000519121 791 ntBASIC4.19□□□□□ -1.74
CTCFP49711 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
CTCFP49711 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.19□□□□□ -1.74
CTCFP49711 AP000926.4-201ENST00000527351 454 ntBASIC4.19□□□□□ -1.74
CTCFP49711 CYCSP2-201ENST00000558168 301 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AC007687.1-201ENST00000602704 304 ntBASIC4.19□□□□□ -1.74
CTCFP49711 AL034351.1-201ENST00000605288 668 ntBASIC4.19□□□□□ -1.74
CTCFP49711 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.19□□□□□ -1.74
CTCFP49711 AC091304.6-201ENST00000619761 202 ntBASIC4.19□□□□□ -1.74
CTCFP49711 MIR7843-201ENST00000622274 79 ntBASIC4.19□□□□□ -1.74
CTCFP49711 CYP3A51P-201ENST00000633513 256 ntBASIC4.19□□□□□ -1.74
CTCFP49711 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.19□□□□□ -1.74
CTCFP49711 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.19□□□□□ -1.74
CTCFP49711 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.19□□□□□ -1.74
CTCFP49711 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 AP002907.1-201ENST00000606361 1430 ntBASIC4.19□□□□□ -1.74
CTCFP49711 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTCFP49711 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.18□□□□□ -1.74
CTCFP49711 TNPO1P3-201ENST00000436471 2662 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AL391994.1-201ENST00000254724 282 ntBASIC4.18□□□□□ -1.74
CTCFP49711 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 SNORA7.2-201ENST00000364446 145 ntBASIC4.18□□□□□ -1.74
CTCFP49711 SNORD82-201ENST00000365530 70 ntBASIC4.18□□□□□ -1.74
CTCFP49711 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.18□□□□□ -1.74
CTCFP49711 RNU6-328P-201ENST00000390887 106 ntBASIC4.18□□□□□ -1.74
CTCFP49711 SOD2P1-201ENST00000396543 562 ntBASIC4.18□□□□□ -1.74
CTCFP49711 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.18□□□□□ -1.74
CTCFP49711 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 FNDC3CP-201ENST00000420795 1155 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AL035407.1-201ENST00000429211 571 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.18□□□□□ -1.74
CTCFP49711 HMGB1P18-201ENST00000438801 619 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.18□□□□□ -1.74
CTCFP49711 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.18□□□□□ -1.74
CTCFP49711 MTCYBP3-201ENST00000445588 1137 ntBASIC4.18□□□□□ -1.74
CTCFP49711 MTND2P19-201ENST00000449129 1012 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AC140076.1-201ENST00000449897 361 ntBASIC4.18□□□□□ -1.74
CTCFP49711 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.18□□□□□ -1.74
CTCFP49711 HMGN2P7-201ENST00000456186 273 ntBASIC4.18□□□□□ -1.74
CTCFP49711 snoU13.3-201ENST00000459441 104 ntBASIC4.18□□□□□ -1.74
CTCFP49711 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.18□□□□□ -1.74
CTCFP49711 AC114981.1-201ENST00000503897 678 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AC026412.2-201ENST00000512270 1075 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AC026801.2-201ENST00000515352 425 ntBASIC4.18□□□□□ -1.74
CTCFP49711 SNORA70.18-201ENST00000516696 98 ntBASIC4.18□□□□□ -1.74
CTCFP49711 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.18□□□□□ -1.74
CTCFP49711 AC002400.1-201ENST00000569310 726 ntBASIC4.18□□□□□ -1.74
CTCFP49711 MIR4524B-201ENST00000581569 115 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AL357094.1-201ENST00000603845 844 ntBASIC4.18□□□□□ -1.74
CTCFP49711 SNORA62.6-201ENST00000606322 83 ntBASIC4.18□□□□□ -1.74
CTCFP49711 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.18□□□□□ -1.74
CTCFP49711 AC073968.1-201ENST00000618594 637 ntBASIC4.18□□□□□ -1.74
CTCFP49711 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.18□□□□□ -1.74
CTCFP49711 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.18□□□□□ -1.74
CTCFP49711 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.18□□□□□ -1.74
CTCFP49711 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CTCFP49711 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CTCFP49711 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
CTCFP49711 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 RPS4XP5-202ENST00000449995 1334 ntBASIC4.18□□□□□ -1.74
CTCFP49711 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTCFP49711 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTCFP49711 AL079343.1-201ENST00000572358 1771 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AC007656.2-201ENST00000624902 4547 ntBASIC4.17□□□□□ -1.74
CTCFP49711 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTCFP49711 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CTCFP49711 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTCFP49711 RPL31P1-201ENST00000398116 372 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AL049545.1-201ENST00000401856 572 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AL121972.1-201ENST00000402023 252 ntBASIC4.17□□□□□ -1.74
CTCFP49711 HMGB1P17-201ENST00000403495 628 ntBASIC4.17□□□□□ -1.74
CTCFP49711 USP9YP33-201ENST00000412220 421 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.17□□□□□ -1.74
CTCFP49711 AL953862.1-201ENST00000423016 168 ntBASIC4.17□□□□□ -1.74
CTCFP49711 SRIP2-201ENST00000428470 166 ntBASIC4.17□□□□□ -1.74
CTCFP49711 TXNL1P1-201ENST00000429528 554 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.17□□□□□ -1.74
CTCFP49711 MTND5P25-201ENST00000430499 799 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.17□□□□□ -1.74
CTCFP49711 RPS6P15-201ENST00000431996 751 ntBASIC4.17□□□□□ -1.74
CTCFP49711 USP9YP35-201ENST00000435696 412 ntBASIC4.17□□□□□ -1.74
CTCFP49711 MTCYBP34-201ENST00000439552 670 ntBASIC4.17□□□□□ -1.74
CTCFP49711 HMGB1P37-201ENST00000439613 609 ntBASIC4.17□□□□□ -1.74
CTCFP49711 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.17□□□□□ -1.74
CTCFP49711 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.17□□□□□ -1.74
CTCFP49711 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.17□□□□□ -1.74
CTCFP49711 MTCO3P11-201ENST00000455103 774 ntBASIC4.17□□□□□ -1.74
CTCFP49711 ATG12P2-201ENST00000456830 416 ntBASIC4.17□□□□□ -1.74
CTCFP49711 AC097493.1-201ENST00000463958 372 ntBASIC4.17□□□□□ -1.74
CTCFP49711 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.17□□□□□ -1.74
CTCFP49711 RPS20P22-201ENST00000473700 357 ntBASIC4.17□□□□□ -1.74
CTCFP49711 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTCFP49711 AC017037.2-201ENST00000513850 890 ntBASIC4.17□□□□□ -1.74
CTCFP49711 RN7SKP116-201ENST00000516902 319 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms