Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MTCO1P43-201ENST00000431831 488 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 RPL23AP74-201ENST00000437246 471 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC002542.1-201ENST00000440683 193 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 HMGN2P21-201ENST00000447764 270 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AL034418.1-201ENST00000448675 860 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC092451.1-201ENST00000480211 153 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 RPL23AP49-201ENST00000492925 468 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 RNU6-362P-201ENST00000516736 90 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 MTND2P26-201ENST00000528255 1029 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 AC104237.2-201ENST00000612456 443 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC048347.1-201ENST00000624621 427 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
BRCA1P38398 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA1P38398 ZNF355P-201ENST00000427301 3216 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA1P38398 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.92□□□□□ -1.94
BRCA1P38398 AF127577.6-201ENST00000623352 2191 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 RNU6-328P-201ENST00000390887 106 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AL023284.1-201ENST00000403956 276 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AL133384.1-201ENST00000412744 351 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 AC005517.2-201ENST00000424673 553 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.92□□□□□ -1.94
BRCA1P38398 AC018634.1-201ENST00000437554 401 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 ST13P20-201ENST00000447996 1065 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BRCA1P38398 RPL36AP21-201ENST00000490372 323 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.92□□□□□ -1.94
BRCA1P38398 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.92□□□□□ -1.94
BRCA1P38398 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
BRCA1P38398 MTCYBP28-201ENST00000566728 1132 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC135178.6-201ENST00000605314 398 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC113194.1-201ENST00000606037 500 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AC006023.2-201ENST00000609916 167 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.92□□□□□ -1.94
BRCA1P38398 AL353997.5-201ENST00000618886 171 ntBASIC2.92□□□□□ -1.94
BRCA1P38398 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.92□□□□□ -1.94
BRCA1P38398 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA1P38398 OR5T3-201ENST00000303059 1023 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 SFR1P1-201ENST00000403720 688 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA1P38398 CKS1BP5-201ENST00000434172 273 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA1P38398 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.91□□□□□ -1.94
BRCA1P38398 AC007000.2-201ENST00000442564 487 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 AL592437.1-201ENST00000443781 492 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA1P38398 SYPL1P1-201ENST00000473622 768 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.91□□□□□ -1.94
BRCA1P38398 RPL23AP11-201ENST00000475260 469 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA1P38398 AC110792.2-201ENST00000510278 224 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 TMEM248P1-201ENST00000510579 951 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA1P38398 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.91□□□□□ -1.94
BRCA1P38398 AC104229.1-201ENST00000561364 255 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 MIR5092-201ENST00000583139 88 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 AC012119.1-201ENST00000603184 222 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 AL450270.1-201ENST00000606160 391 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 VN1R9P-201ENST00000614184 867 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA1P38398 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA1P38398 MTND4P21-201ENST00000453886 1357 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.91□□□□□ -1.94
BRCA1P38398 AP001148.1-201ENST00000624124 2359 ntBASIC2.91□□□□□ -1.94
BRCA1P38398 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
BRCA1P38398 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
BRCA1P38398 RNA5SP295-201ENST00000362655 121 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
BRCA1P38398 RNU6-1293P-201ENST00000384077 107 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 RNU2-37P-201ENST00000410695 177 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AC004022.2-201ENST00000413824 193 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AC092170.1-201ENST00000440211 356 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.94
BRCA1P38398 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.9□□□□□ -1.94
BRCA1P38398 TPRKBP1-201ENST00000456243 481 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.9□□□□□ -1.94
BRCA1P38398 VN1R17P-201ENST00000472048 1090 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.9□□□□□ -1.94
BRCA1P38398 RPL21P47-201ENST00000483696 477 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AP001086.1-201ENST00000494882 321 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.9□□□□□ -1.94
BRCA1P38398 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.9□□□□□ -1.94
BRCA1P38398 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.9□□□□□ -1.94
BRCA1P38398 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.9□□□□□ -1.94
BRCA1P38398 AC007687.1-201ENST00000602704 304 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AC011468.4-201ENST00000603942 409 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.9□□□□□ -1.94
BRCA1P38398 AC096586.1-201ENST00000610267 561 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 RNU6-156P-201ENST00000621869 107 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.94
BRCA1P38398 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
BRCA1P38398 MTCO1P6-201ENST00000481192 1384 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms