Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXD13P35453 AL356274.2-201ENST00000624379 3752 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD13P35453 RPL21P132-201ENST00000331267 462 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 Y_RNA.18-201ENST00000362461 102 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 RNU6-744P-201ENST00000365557 107 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 RNA5SP88-201ENST00000365560 109 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 RNU6-1316P-201ENST00000384242 108 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 MIR554-201ENST00000384874 96 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.83□□□□□ -1.8
HOXD13P35453 MTCO1P17-201ENST00000411522 491 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXD13P35453 AC068533.1-201ENST00000418542 415 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD13P35453 RPL27AP8-201ENST00000424277 446 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD13P35453 AC092017.2-201ENST00000427600 362 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD13P35453 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 MTCO1P27-201ENST00000448269 226 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 RPS4XP2-201ENST00000458402 793 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AC078785.3-201ENST00000476607 425 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AC021382.1-201ENST00000483523 359 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AC106872.3-201ENST00000495104 446 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 RPL7P47-201ENST00000497299 556 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 SNORA67.7-201ENST00000516664 135 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 PAICSP4-201ENST00000517543 1253 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 AC023538.1-201ENST00000534576 736 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 SETP2-201ENST00000553886 926 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD13P35453 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD13P35453 MTATP6P24-201ENST00000576835 677 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 ISCA1P3-201ENST00000577104 373 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
HOXD13P35453 AC009464.1-201ENST00000615731 469 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 MIR6130-201ENST00000619419 109 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD13P35453 CEP170P1-201ENST00000502249 4587 ntBASIC3.83□□□□□ -1.8
HOXD13P35453 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD13P35453 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD13P35453 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXD13P35453 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HOXD13P35453 AC005832.2-201ENST00000538921 1430 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 SNORD17-201ENST00000390930 237 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 RN7SKP266-201ENST00000410232 287 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD13P35453 SSXP9-201ENST00000417503 292 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD13P35453 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD13P35453 AC108734.1-201ENST00000439549 399 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD13P35453 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD13P35453 AL136097.1-201ENST00000456945 913 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD13P35453 AC112673.1-201ENST00000513168 575 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC034159.1-201ENST00000513885 583 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 RNU2-27P-201ENST00000516185 142 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 HMGN1P28-201ENST00000521340 364 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD13P35453 AP000926.4-201ENST00000527351 454 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC103843.2-201ENST00000530523 682 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 OR5B10P-201ENST00000532869 642 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC068587.4-201ENST00000533893 186 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD13P35453 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD13P35453 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXD13P35453 MED28P6-201ENST00000558776 231 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC136618.2-201ENST00000575091 400 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 MIR3158-1-201ENST00000583596 81 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD13P35453 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXD13P35453 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXD13P35453 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD13P35453 BDH2P1-201ENST00000602288 736 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AC026790.2-201ENST00000606282 430 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 AL356596.1-201ENST00000624230 379 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD13P35453 MIR4275-201ENST00000636486 87 ntBASIC3.82□□□□□ -1.8
HOXD13P35453 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD13P35453 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXD13P35453 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HOXD13P35453 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXD13P35453 MFSD8-233ENST00000641482 4860 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD13P35453 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD13P35453 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD13P35453 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD13P35453 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD13P35453 RSL24D1P4-201ENST00000400938 484 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AL591034.1-201ENST00000407447 340 ntBASIC3.81□□□□□ -1.8
HOXD13P35453 AC098592.1-201ENST00000419352 333 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms