Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC022616.2-201ENST00000523185 300 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.39□□□□□ -2.03
COL4A5P29400 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A5P29400 MIR4303-201ENST00000581299 66 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 TPMTP1-201ENST00000592307 737 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.39□□□□□ -2.03
COL4A5P29400 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.39□□□□□ -2.03
COL4A5P29400 AL133412.1-201ENST00000380194 2992 ntBASIC2.39□□□□□ -2.03
COL4A5P29400 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL4A5P29400 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL4A5P29400 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL4A5P29400 RNU6-317P-201ENST00000384031 107 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 SAR1AP2-201ENST00000392696 594 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 RPL31P52-201ENST00000407532 367 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.38□□□□□ -2.03
COL4A5P29400 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.38□□□□□ -2.03
COL4A5P29400 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.38□□□□□ -2.03
COL4A5P29400 AC021087.2-201ENST00000504656 1203 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
COL4A5P29400 snoZ278.1-201ENST00000517059 112 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 HMGB1P1-201ENST00000522557 636 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 AL161713.1-201ENST00000555538 145 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 MIR4458-201ENST00000578872 75 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.38□□□□□ -2.03
COL4A5P29400 RPAP2P1-201ENST00000603626 1168 ntBASIC2.38□□□□□ -2.03
COL4A5P29400 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL4A5P29400 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 RNU6-582P-201ENST00000362989 107 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 RNU6-666P-201ENST00000363499 107 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.37□□□□□ -2.03
COL4A5P29400 AL445685.2-201ENST00000422551 342 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.37□□□□□ -2.03
COL4A5P29400 AL353093.1-201ENST00000441292 436 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.37□□□□□ -2.03
COL4A5P29400 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.37□□□□□ -2.03
COL4A5P29400 HMGB3P30-201ENST00000457863 606 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 MTAPP1-201ENST00000489154 819 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AC005840.1-201ENST00000498412 377 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AC026241.1-201ENST00000517873 2142 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A5P29400 AC126177.3-201ENST00000551839 688 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 MIR5089-201ENST00000580047 84 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.37□□□□□ -2.03
COL4A5P29400 MIR3683-201ENST00000580847 82 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AL391834.1-201ENST00000609609 560 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
COL4A5P29400 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
COL4A5P29400 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A5P29400 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.37□□□□□ -2.03
COL4A5P29400 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
COL4A5P29400 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.37□□□□□ -2.03
COL4A5P29400 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.37□□□□□ -2.03
COL4A5P29400 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL4A5P29400 AP003385.6-201ENST00000531603 374 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AC018754.1-201ENST00000607486 925 ntBASIC2.37□□□□□ -2.03
COL4A5P29400 AC096656.1-201ENST00000623826 1364 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A5P29400 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A5P29400 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A5P29400 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL4A5P29400 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A5P29400 TPMTP4-201ENST00000450749 678 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 AL445669.2-201ENST00000454425 421 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 RPL23AP44-201ENST00000482216 473 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 AC007182.2-201ENST00000489251 402 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.36□□□□□ -2.03
COL4A5P29400 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.36□□□□□ -2.03
COL4A5P29400 RNA5SP490-201ENST00000517141 136 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.36□□□□□ -2.03
COL4A5P29400 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A5P29400 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.36□□□□□ -2.03
COL4A5P29400 OR1S1-201ENST00000624470 978 ntBASIC2.36□□□□□ -2.03
COL4A5P29400 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
COL4A5P29400 AC027514.1-201ENST00000588561 1603 ntBASIC2.35□□□□□ -2.03
COL4A5P29400 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
COL4A5P29400 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A5P29400 RN7SKP123-201ENST00000410732 291 ntBASIC2.35□□□□□ -2.03
COL4A5P29400 AP1B1P2-201ENST00000416196 106 ntBASIC2.35□□□□□ -2.03
COL4A5P29400 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A5P29400 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.35□□□□□ -2.03
COL4A5P29400 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.35□□□□□ -2.03
COL4A5P29400 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.35□□□□□ -2.03
COL4A5P29400 AC004943.3-201ENST00000624116 600 ntBASIC2.35□□□□□ -2.03
COL4A5P29400 AC090897.3-201ENST00000636973 1157 ntBASIC2.35□□□□□ -2.03
COL4A5P29400 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
COL4A5P29400 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL4A5P29400 SNORD6-201ENST00000365444 73 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 CCNB2P1-201ENST00000399411 1150 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 DHFRP5-201ENST00000406944 564 ntBASIC2.34□□□□□ -2.03
COL4A5P29400 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A5P29400 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.34□□□□□ -2.03
COL4A5P29400 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A5P29400 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms