Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 AL360270.2-201ENST00000562952 5985 ntBASIC4.7□□□□□ -1.66
ATF4P18848 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATF4P18848 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATF4P18848 AL592182.3-201ENST00000642132 3304 ntBASIC4.7□□□□□ -1.66
ATF4P18848 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.7□□□□□ -1.66
ATF4P18848 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 Y_RNA.212-201ENST00000364177 102 ntBASIC4.7□□□□□ -1.66
ATF4P18848 SNORA4.3-201ENST00000365564 137 ntBASIC4.7□□□□□ -1.66
ATF4P18848 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATF4P18848 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.7□□□□□ -1.66
ATF4P18848 SNORA11.3-201ENST00000408471 128 ntBASIC4.7□□□□□ -1.66
ATF4P18848 SNORA77.2-201ENST00000408571 112 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RNA5SP129-201ENST00000410276 118 ntBASIC4.7□□□□□ -1.66
ATF4P18848 Z85995.1-201ENST00000415547 335 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RPL21P109-201ENST00000422213 475 ntBASIC4.7□□□□□ -1.66
ATF4P18848 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.7□□□□□ -1.66
ATF4P18848 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.7□□□□□ -1.66
ATF4P18848 AC009237.8-201ENST00000445492 379 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.7□□□□□ -1.66
ATF4P18848 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.7□□□□□ -1.66
ATF4P18848 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 RN7SL254P-201ENST00000460609 284 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.7□□□□□ -1.66
ATF4P18848 HSD3BP3-201ENST00000514706 994 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RNU6-1069P-201ENST00000516612 133 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RNU6-1088P-201ENST00000516850 104 ntBASIC4.7□□□□□ -1.66
ATF4P18848 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 BNIP3P1-201ENST00000547295 580 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC079600.1-201ENST00000550326 297 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC007151.1-201ENST00000572774 483 ntBASIC4.7□□□□□ -1.66
ATF4P18848 MIR4790-201ENST00000577799 79 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC053481.4-201ENST00000583164 216 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RN7SL52P-201ENST00000584271 284 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.7□□□□□ -1.66
ATF4P18848 AC079315.1-201ENST00000602952 623 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AL499605.1-201ENST00000604628 403 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RN7SL787P-201ENST00000613000 284 ntBASIC4.7□□□□□ -1.66
ATF4P18848 AC090132.2-201ENST00000615881 347 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RN7SL544P-201ENST00000617232 284 ntBASIC4.7□□□□□ -1.66
ATF4P18848 SNORA11.6-201ENST00000619030 128 ntBASIC4.7□□□□□ -1.66
ATF4P18848 RN7SL763P-201ENST00000620922 284 ntBASIC4.7□□□□□ -1.66
ATF4P18848 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.7□□□□□ -1.66
ATF4P18848 AL160413.1-201ENST00000622780 310 ntBASIC4.7□□□□□ -1.66
ATF4P18848 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
ATF4P18848 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
ATF4P18848 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.7□□□□□ -1.66
ATF4P18848 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATF4P18848 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
ATF4P18848 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
ATF4P18848 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATF4P18848 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.69□□□□□ -1.66
ATF4P18848 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATF4P18848 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATF4P18848 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ATF4P18848 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.69□□□□□ -1.66
ATF4P18848 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATF4P18848 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATF4P18848 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATF4P18848 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATF4P18848 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATF4P18848 RNU1-49P-201ENST00000363468 159 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RNU6-395P-201ENST00000365662 106 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RNU6-128P-201ENST00000383976 107 ntBASIC4.69□□□□□ -1.66
ATF4P18848 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATF4P18848 AL356057.2-201ENST00000403318 432 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RN7SKP121-201ENST00000410842 305 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RN7SKP263-201ENST00000411194 309 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RAB28P1-201ENST00000411517 641 ntBASIC4.69□□□□□ -1.66
ATF4P18848 CRYBB2P1-203ENST00000415709 538 ntBASIC4.69□□□□□ -1.66
ATF4P18848 AC016831.2-201ENST00000417179 352 ntBASIC4.69□□□□□ -1.66
ATF4P18848 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.69□□□□□ -1.66
ATF4P18848 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.69□□□□□ -1.66
ATF4P18848 OSTCP4-201ENST00000424397 449 ntBASIC4.69□□□□□ -1.66
ATF4P18848 SNAP23P1-201ENST00000433229 246 ntBASIC4.69□□□□□ -1.66
ATF4P18848 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATF4P18848 HSFY6P-201ENST00000445573 403 ntBASIC4.69□□□□□ -1.66
ATF4P18848 Y_RNA.632-201ENST00000459189 102 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RN7SL39P-201ENST00000462264 297 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RPL7P43-201ENST00000478876 753 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RPS4XP1-201ENST00000482189 787 ntBASIC4.69□□□□□ -1.66
ATF4P18848 AC068587.1-201ENST00000483613 781 ntBASIC4.69□□□□□ -1.66
ATF4P18848 RN7SL214P-201ENST00000487317 265 ntBASIC4.69□□□□□ -1.66
ATF4P18848 HMGB1P30-201ENST00000492455 606 ntBASIC4.69□□□□□ -1.66
ATF4P18848 AC026979.1-201ENST00000492525 396 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms