Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL3L1P16619 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.72□□□□□ -2.13
CCL3L1P16619 PRELID2P1-201ENST00000552837 301 ntBASIC1.72□□□□□ -2.13
CCL3L1P16619 DNAJC8P1-201ENST00000554535 372 ntBASIC1.72□□□□□ -2.13
CCL3L1P16619 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL3L1P16619 AC011472.4-201ENST00000615848 491 ntBASIC1.72□□□□□ -2.13
CCL3L1P16619 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL3L1P16619 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.72□□□□□ -2.13
CCL3L1P16619 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
CCL3L1P16619 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCL3L1P16619 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CCL3L1P16619 SNORD56.5-201ENST00000364281 72 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 CYCSP45-201ENST00000402289 315 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 MTND4LP20-201ENST00000402379 270 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 FO393413.1-201ENST00000402892 195 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCL3L1P16619 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.71□□□□□ -2.14
CCL3L1P16619 Z98742.2-201ENST00000431564 187 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.71□□□□□ -2.14
CCL3L1P16619 RPS24P6-201ENST00000452670 400 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.71□□□□□ -2.14
CCL3L1P16619 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.71□□□□□ -2.14
CCL3L1P16619 SEM1P1-201ENST00000506694 209 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 SNORA31.15-201ENST00000516771 132 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 RNU6-1308P-201ENST00000516817 103 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 CIR1P1-201ENST00000524055 1133 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 OSBPL9P3-201ENST00000534523 595 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 MIR5002-201ENST00000584713 97 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 AC013412.1-201ENST00000610687 192 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 AC245517.5-201ENST00000611529 162 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
CCL3L1P16619 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCL3L1P16619 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCL3L1P16619 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCL3L1P16619 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCL3L1P16619 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCL3L1P16619 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CCL3L1P16619 RNU6-1027P-201ENST00000383998 107 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AL139156.1-201ENST00000412785 841 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AL049737.1-201ENST00000413920 1403 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AC104454.1-201ENST00000421341 1401 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 MTCO3P30-201ENST00000426425 670 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AC010881.1-201ENST00000433830 235 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 SNRPEP4-201ENST00000435815 279 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 RABEPKP1-201ENST00000440529 1026 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AL035407.2-201ENST00000454090 378 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 RPS29P12-201ENST00000460178 152 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 RPL30P9-201ENST00000465586 330 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL3L1P16619 RPL7L1P13-201ENST00000511702 739 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.7□□□□□ -2.14
CCL3L1P16619 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AC025881.1-201ENST00000518851 512 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.7□□□□□ -2.14
CCL3L1P16619 AC068313.1-201ENST00000604028 1008 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AL121917.1-203ENST00000605534 577 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.7□□□□□ -2.14
CCL3L1P16619 NF1P10-201ENST00000613227 742 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 AL356266.1-201ENST00000623311 483 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.7□□□□□ -2.14
CCL3L1P16619 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.69□□□□□ -2.14
CCL3L1P16619 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCL3L1P16619 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.69□□□□□ -2.14
CCL3L1P16619 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CCL3L1P16619 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.69□□□□□ -2.14
CCL3L1P16619 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCL3L1P16619 RNU6-799P-201ENST00000363567 107 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 RNA5SP160-201ENST00000364866 120 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 SNORA70B-201ENST00000384210 135 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 RNU6-167P-201ENST00000384292 106 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 RNU6-253P-201ENST00000384730 105 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 RNU6-233P-201ENST00000410845 141 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 RN7SKP192-201ENST00000411291 327 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL3L1P16619 BX682237.1-201ENST00000415016 335 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 AC234782.4-201ENST00000417646 1048 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 MTCYBP24-201ENST00000420387 1106 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 AC027124.2-201ENST00000428249 105 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 SDR42E1P3-201ENST00000438345 502 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.69□□□□□ -2.14
CCL3L1P16619 USP9YP8-201ENST00000441913 500 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL3L1P16619 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.69□□□□□ -2.14
CCL3L1P16619 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.69□□□□□ -2.14
CCL3L1P16619 BUD31P2-201ENST00000449374 300 ntBASIC1.69□□□□□ -2.14
CCL3L1P16619 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL3L1P16619 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.69□□□□□ -2.14
CCL3L1P16619 AP002345.1-201ENST00000456493 928 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms