Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL512649.1-201ENST00000428997 581 ntBASIC4□□□□□ -1.77
MMP3P08254 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4□□□□□ -1.77
MMP3P08254 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4□□□□□ -1.77
MMP3P08254 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4□□□□□ -1.77
MMP3P08254 ST13P20-201ENST00000447996 1065 ntBASIC4□□□□□ -1.77
MMP3P08254 BX276092.4-201ENST00000452056 248 ntBASIC4□□□□□ -1.77
MMP3P08254 RPL21P10-201ENST00000463521 490 ntBASIC4□□□□□ -1.77
MMP3P08254 PABPC1P3-201ENST00000469174 459 ntBASIC4□□□□□ -1.77
MMP3P08254 AP000797.1-201ENST00000478870 387 ntBASIC4□□□□□ -1.77
MMP3P08254 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4□□□□□ -1.77
MMP3P08254 FAM172BP-201ENST00000487497 1089 ntBASIC4□□□□□ -1.77
MMP3P08254 AC093767.1-201ENST00000504523 156 ntBASIC4□□□□□ -1.77
MMP3P08254 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4□□□□□ -1.77
MMP3P08254 AC010625.1-201ENST00000511296 403 ntBASIC4□□□□□ -1.77
MMP3P08254 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4□□□□□ -1.77
MMP3P08254 GMPSP1-201ENST00000514075 579 ntBASIC4□□□□□ -1.77
MMP3P08254 AC025881.1-201ENST00000518851 512 ntBASIC4□□□□□ -1.77
MMP3P08254 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4□□□□□ -1.77
MMP3P08254 AP002748.2-201ENST00000528671 348 ntBASIC4□□□□□ -1.77
MMP3P08254 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4□□□□□ -1.77
MMP3P08254 RFPL1S-203ENST00000539579 330 ntBASIC4□□□□□ -1.77
MMP3P08254 AC074029.1-201ENST00000552531 1044 ntBASIC4□□□□□ -1.77
MMP3P08254 MIR5186-201ENST00000577504 120 ntBASIC4□□□□□ -1.77
MMP3P08254 MTND1P15-201ENST00000579262 949 ntBASIC4□□□□□ -1.77
MMP3P08254 MIR4512-201ENST00000583257 77 ntBASIC4□□□□□ -1.77
MMP3P08254 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4□□□□□ -1.77
MMP3P08254 AC078795.2-201ENST00000602835 1252 ntBASIC4□□□□□ -1.77
MMP3P08254 BBIP1P1-201ENST00000602999 279 ntBASIC4□□□□□ -1.77
MMP3P08254 AC005000.2-201ENST00000605468 310 ntBASIC4□□□□□ -1.77
MMP3P08254 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4□□□□□ -1.77
MMP3P08254 MIR8058-201ENST00000615737 89 ntBASIC4□□□□□ -1.77
MMP3P08254 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4□□□□□ -1.77
MMP3P08254 AC009509.4-201ENST00000619202 509 ntBASIC4□□□□□ -1.77
MMP3P08254 AL732618.1-201ENST00000623251 301 ntBASIC4□□□□□ -1.77
MMP3P08254 AC091905.1-201ENST00000624400 311 ntBASIC4□□□□□ -1.77
MMP3P08254 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MMP3P08254 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
MMP3P08254 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4□□□□□ -1.77
MMP3P08254 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4□□□□□ -1.77
MMP3P08254 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4□□□□□ -1.77
MMP3P08254 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4□□□□□ -1.77
MMP3P08254 AL139811.1-201ENST00000424779 2299 ntBASIC4□□□□□ -1.77
MMP3P08254 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4□□□□□ -1.77
MMP3P08254 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
MMP3P08254 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 RPL23AP57-201ENST00000332361 466 ntBASIC3.99□□□□□ -1.77
MMP3P08254 SNORD82-201ENST00000365530 70 ntBASIC3.99□□□□□ -1.77
MMP3P08254 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.99□□□□□ -1.77
MMP3P08254 HMGB1P17-201ENST00000403495 628 ntBASIC3.99□□□□□ -1.77
MMP3P08254 RNA5SP239-201ENST00000410218 129 ntBASIC3.99□□□□□ -1.77
MMP3P08254 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.99□□□□□ -1.77
MMP3P08254 TPMTP2-201ENST00000414372 726 ntBASIC3.99□□□□□ -1.77
MMP3P08254 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.99□□□□□ -1.77
MMP3P08254 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.99□□□□□ -1.77
MMP3P08254 USP9YP14-201ENST00000430663 563 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC005019.1-201ENST00000436455 431 ntBASIC3.99□□□□□ -1.77
MMP3P08254 SNRPEP7-201ENST00000438350 220 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 GDI2P2-201ENST00000445131 608 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC002381.1-201ENST00000447049 280 ntBASIC3.99□□□□□ -1.77
MMP3P08254 RPL7P31-201ENST00000450192 724 ntBASIC3.99□□□□□ -1.77
MMP3P08254 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 DNAJC19P1-201ENST00000455312 319 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.99□□□□□ -1.77
MMP3P08254 AC109458.1-201ENST00000508858 316 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC093809.1-201ENST00000509155 340 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.99□□□□□ -1.77
MMP3P08254 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.99□□□□□ -1.77
MMP3P08254 AC116347.2-201ENST00000514912 523 ntBASIC3.99□□□□□ -1.77
MMP3P08254 RNA5SP216-201ENST00000516111 123 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.99□□□□□ -1.77
MMP3P08254 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.99□□□□□ -1.77
MMP3P08254 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.99□□□□□ -1.77
MMP3P08254 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 PTP4A1P6-201ENST00000531034 478 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AP004247.1-201ENST00000531556 1289 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.99□□□□□ -1.77
MMP3P08254 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.99□□□□□ -1.77
MMP3P08254 AC091489.2-201ENST00000566263 604 ntBASIC3.99□□□□□ -1.77
MMP3P08254 MIR544B-201ENST00000582372 78 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.99□□□□□ -1.77
MMP3P08254 AC068790.6-201ENST00000602558 258 ntBASIC3.99□□□□□ -1.77
MMP3P08254 DEFB131E-202ENST00000602581 683 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC087752.4-201ENST00000605911 462 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC005332.10-201ENST00000612725 619 ntBASIC3.99□□□□□ -1.77
MMP3P08254 AC026585.1-201ENST00000619582 524 ntBASIC3.99□□□□□ -1.77
MMP3P08254 U4.6-201ENST00000621618 127 ntBASIC3.99□□□□□ -1.77
MMP3P08254 FAM157B-203ENST00000639350 358 ntBASIC3.99□□□□□ -1.77
MMP3P08254 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.99□□□□□ -1.77
MMP3P08254 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
MMP3P08254 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MMP3P08254 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms