Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AP000705.1-201ENST00000454567 350 ntBASIC1.19□□□□□ -2.22
APOBP04114 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.19□□□□□ -2.22
APOBP04114 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.19□□□□□ -2.22
APOBP04114 MIR6073-201ENST00000352083 89 ntBASIC1.18□□□□□ -2.22
APOBP04114 Y_RNA.295-201ENST00000364918 102 ntBASIC1.18□□□□□ -2.22
APOBP04114 RN7SL283P-201ENST00000489055 303 ntBASIC1.18□□□□□ -2.22
APOBP04114 AC090071.1-201ENST00000507713 644 ntBASIC1.18□□□□□ -2.22
APOBP04114 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.18□□□□□ -2.22
APOBP04114 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.18□□□□□ -2.22
APOBP04114 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
APOBP04114 HPVC1-201ENST00000629899 1198 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.18□□□□□ -2.22
APOBP04114 AC131280.1-202ENST00000624067 4211 ntBASIC1.18□□□□□ -2.22
APOBP04114 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
APOBP04114 AC092326.2-201ENST00000624772 1561 ntBASIC1.18□□□□□ -2.22
APOBP04114 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.18□□□□□ -2.22
APOBP04114 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.18□□□□□ -2.22
APOBP04114 RPL23AP61-201ENST00000623642 466 ntBASIC1.18□□□□□ -2.22
APOBP04114 AC095038.3-201ENST00000634439 195 ntBASIC1.18□□□□□ -2.22
APOBP04114 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
APOBP04114 FAM35CP-201ENST00000554755 2470 ntBASIC1.18□□□□□ -2.22
APOBP04114 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
APOBP04114 uc_338.5-201ENST00000611839 155 ntBASIC1.18□□□□□ -2.22
APOBP04114 AC005296.1-201ENST00000616145 209 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL359740.1-201ENST00000624340 592 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL512283.1-201ENST00000606756 1384 ntBASIC1.18□□□□□ -2.22
APOBP04114 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
APOBP04114 AC129850.1-201ENST00000436203 508 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL137159.1-201ENST00000452808 512 ntBASIC1.18□□□□□ -2.22
APOBP04114 PPP1R2P5-201ENST00000457256 603 ntBASIC1.18□□□□□ -2.22
APOBP04114 AC007536.1-201ENST00000533382 349 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.18□□□□□ -2.22
APOBP04114 AC008015.1-201ENST00000555505 465 ntBASIC1.18□□□□□ -2.22
APOBP04114 AL137072.1-201ENST00000603444 466 ntBASIC1.18□□□□□ -2.22
APOBP04114 AC008526.1-201ENST00000509149 338 ntBASIC1.17□□□□□ -2.22
APOBP04114 MTCYBP37-201ENST00000510642 1133 ntBASIC1.17□□□□□ -2.22
APOBP04114 RN7SKP40-201ENST00000517211 242 ntBASIC1.17□□□□□ -2.22
APOBP04114 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.17□□□□□ -2.22
APOBP04114 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.17□□□□□ -2.22
APOBP04114 AL161670.1-201ENST00000554348 137 ntBASIC1.17□□□□□ -2.22
APOBP04114 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
APOBP04114 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
APOBP04114 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.17□□□□□ -2.22
APOBP04114 RN7SKP234-201ENST00000517173 224 ntBASIC1.17□□□□□ -2.22
APOBP04114 IGKV2D-36-201ENST00000518643 226 ntBASIC1.17□□□□□ -2.22
APOBP04114 AC120053.1-201ENST00000607706 736 ntBASIC1.17□□□□□ -2.22
APOBP04114 AC105429.2-201ENST00000610567 517 ntBASIC1.17□□□□□ -2.22
APOBP04114 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
APOBP04114 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.17□□□□□ -2.22
APOBP04114 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.17□□□□□ -2.22
APOBP04114 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.17□□□□□ -2.22
APOBP04114 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.17□□□□□ -2.22
APOBP04114 MIR4285-201ENST00000581001 85 ntBASIC1.17□□□□□ -2.22
APOBP04114 AL137847.3-201ENST00000611521 109 ntBASIC1.17□□□□□ -2.22
APOBP04114 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
APOBP04114 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.17□□□□□ -2.22
APOBP04114 AC093536.2-201ENST00000565257 1406 ntBASIC1.17□□□□□ -2.22
APOBP04114 RPS3AP9-201ENST00000417027 792 ntBASIC1.16□□□□□ -2.22
APOBP04114 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.16□□□□□ -2.22
APOBP04114 RPL39P40-201ENST00000445481 146 ntBASIC1.16□□□□□ -2.22
APOBP04114 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.16□□□□□ -2.22
APOBP04114 AC007395.1-201ENST00000451333 677 ntBASIC1.16□□□□□ -2.22
APOBP04114 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
APOBP04114 LRRC37A5P-203ENST00000580181 585 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.16□□□□□ -2.22
APOBP04114 VIS1.1-201ENST00000610517 203 ntBASIC1.16□□□□□ -2.22
APOBP04114 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
APOBP04114 MTND5P7-201ENST00000413558 1798 ntBASIC1.16□□□□□ -2.22
APOBP04114 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
APOBP04114 UBE2L2-201ENST00000254302 429 ntBASIC1.16□□□□□ -2.22
APOBP04114 AL391987.6-201ENST00000305671 199 ntBASIC1.16□□□□□ -2.22
APOBP04114 SNORD114-22-201ENST00000365423 72 ntBASIC1.16□□□□□ -2.22
APOBP04114 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.16□□□□□ -2.22
APOBP04114 AC234781.4-201ENST00000419384 244 ntBASIC1.16□□□□□ -2.22
APOBP04114 RPL7P46-201ENST00000425129 740 ntBASIC1.16□□□□□ -2.22
APOBP04114 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC087441.2-201ENST00000529141 262 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.16□□□□□ -2.22
APOBP04114 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.16□□□□□ -2.22
APOBP04114 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
APOBP04114 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.16□□□□□ -2.22
APOBP04114 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.16□□□□□ -2.22
APOBP04114 ARF4P2-201ENST00000430209 526 ntBASIC1.16□□□□□ -2.22
APOBP04114 SSXP1-201ENST00000453640 473 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC140059.1-201ENST00000489238 361 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.16□□□□□ -2.22
APOBP04114 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.16□□□□□ -2.22
APOBP04114 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.16□□□□□ -2.22
APOBP04114 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
APOBP04114 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.16□□□□□ -2.22
APOBP04114 AC244517.1-201ENST00000606030 2086 ntBASIC1.16□□□□□ -2.22
APOBP04114 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
APOBP04114 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
APOBP04114 AC023128.2-201ENST00000420880 1223 ntBASIC1.16□□□□□ -2.22
APOBP04114 HSPE1P28-201ENST00000443139 211 ntBASIC1.16□□□□□ -2.22
APOBP04114 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.16□□□□□ -2.22
APOBP04114 AC107015.1-201ENST00000466902 747 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC005951.1-201ENST00000576706 485 ntBASIC1.16□□□□□ -2.22
APOBP04114 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms