Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PDGFAP04085 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFAP04085 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFAP04085 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 RNU6-266P-201ENST00000364225 107 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 U3.10-201ENST00000364459 214 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 Y_RNA.574-201ENST00000384766 95 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC005042.1-201ENST00000393397 800 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC009804.1-201ENST00000400949 179 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AL133388.1-201ENST00000404509 287 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC097713.2-201ENST00000430199 356 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 USP9YP30-201ENST00000430729 455 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 RPL23AP50-201ENST00000434149 455 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 CKS1BP5-201ENST00000434172 273 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFAP04085 HMGB3P30-201ENST00000457863 606 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC245028.2-201ENST00000458673 253 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 RNU7-138P-201ENST00000459479 64 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 RN7SL352P-201ENST00000466002 277 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 AC092451.1-201ENST00000480211 153 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 RPS23P1-201ENST00000491662 432 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 DEFB109F-201ENST00000491870 277 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 Y_RNA.721-201ENST00000517207 102 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC021678.3-201ENST00000517893 476 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFAP04085 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFAP04085 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.31□□□□□ -1.56
PDGFAP04085 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PDGFAP04085 AC113195.1-201ENST00000579952 141 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 MIR5692A1-201ENST00000580523 69 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 MIR4660-201ENST00000583549 74 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AC005224.3-201ENST00000584683 2140 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.31□□□□□ -1.56
PDGFAP04085 AL512329.2-201ENST00000607350 548 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 MIR6748-201ENST00000610433 71 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 AL121612.2-201ENST00000612261 482 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.31□□□□□ -1.56
PDGFAP04085 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
PDGFAP04085 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
PDGFAP04085 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.31□□□□□ -1.56
PDGFAP04085 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDGFAP04085 AL450326.2-201ENST00000421913 1962 ntBASIC5.31□□□□□ -1.56
PDGFAP04085 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFAP04085 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFAP04085 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 SNORD1C-201ENST00000363315 78 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 RNA5SP131-201ENST00000365452 119 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AL645927.1-201ENST00000396783 406 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AC079809.1-201ENST00000415468 276 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AL133173.1-201ENST00000423458 397 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFAP04085 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AC099670.2-201ENST00000435130 321 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 RPL21P41-201ENST00000459863 264 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AC012158.1-204ENST00000483430 465 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 HMGB1P30-201ENST00000492455 606 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 MRPS33P2-201ENST00000507850 322 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFAP04085 SNORA31.3-201ENST00000516029 96 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 RNU6-635P-201ENST00000516651 102 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFAP04085 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFAP04085 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFAP04085 AC015720.2-201ENST00000567709 334 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 MIR4260-201ENST00000583107 67 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFAP04085 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFAP04085 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 AC026951.1-201ENST00000559530 2459 ntBASIC5.3□□□□□ -1.56
PDGFAP04085 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFAP04085 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFAP04085 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PDGFAP04085 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFAP04085 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFAP04085 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PDGFAP04085 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFAP04085 Y_RNA.389-201ENST00000383924 113 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 MIR153-1-201ENST00000384914 90 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDGFAP04085 HSPE1P8-201ENST00000406997 288 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 DPH3P2-201ENST00000422618 250 ntBASIC5.29□□□□□ -1.56
PDGFAP04085 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms