Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA1P02708 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AL024509.2-201ENST00000493462 493 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AC108078.3-201ENST00000502633 489 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.32□□□□□ -1.88
CHRNA1P02708 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHRNA1P02708 AC004062.1-201ENST00000509926 645 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 RNU6-1028P-201ENST00000517164 93 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
CHRNA1P02708 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.32□□□□□ -1.88
CHRNA1P02708 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA1P02708 AL445435.1-201ENST00000604232 665 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AC092650.2-201ENST00000619984 902 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AC009269.6-201ENST00000621778 588 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AL157770.1-201ENST00000623049 439 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AC004808.1-201ENST00000627671 721 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA1P02708 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA1P02708 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 AL645568.2-201ENST00000432815 1337 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 MTND4P9-201ENST00000507819 1346 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHRNA1P02708 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.32□□□□□ -1.88
CHRNA1P02708 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.32□□□□□ -1.88
CHRNA1P02708 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHRNA1P02708 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA1P02708 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA1P02708 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 NUP58P1-201ENST00000502546 1738 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA1P02708 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CHRNA1P02708 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 AC073325.2-201ENST00000339545 159 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA1P02708 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 SNORA51.6-201ENST00000384151 125 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 RNU6-1257P-201ENST00000384625 110 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AL354692.1-201ENST00000423044 315 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 RPL31P54-201ENST00000429803 370 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 TRIM60P18-201ENST00000441518 828 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 MTCYBP42-201ENST00000444653 1130 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA1P02708 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA1P02708 HMGB1P15-201ENST00000453854 435 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 AC104982.1-201ENST00000478775 574 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA1P02708 SNORD59.2-201ENST00000516873 68 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.31□□□□□ -1.88
CHRNA1P02708 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA1P02708 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA1P02708 MIR5708-201ENST00000579723 85 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AL035411.2-201ENST00000604022 421 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AC093673.2-201ENST00000609674 331 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AC008083.4-201ENST00000615076 444 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AC231759.1-201ENST00000616455 597 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AP003485.1-201ENST00000625093 753 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 AC099654.8-201ENST00000637757 681 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA1P02708 AC244517.1-201ENST00000606030 2086 ntBASIC3.31□□□□□ -1.88
CHRNA1P02708 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA1P02708 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA1P02708 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA1P02708 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA1P02708 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 snoU13.4-201ENST00000458916 104 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 FABP5P12-201ENST00000515543 389 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 SNORA19.3-201ENST00000516165 130 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 RNA5SP468-201ENST00000516782 93 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC027309.2-201ENST00000520566 192 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC239860.2-201ENST00000525886 270 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 OR4P1P-201ENST00000530808 1136 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC090502.2-201ENST00000549267 280 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA1P02708 AL390838.2-201ENST00000602394 274 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AL139022.2-201ENST00000606934 443 ntBASIC3.3□□□□□ -1.88
CHRNA1P02708 AC097504.2-201ENST00000608088 454 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms