Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC073063.1-201ENST00000434352 607 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 MTCYBP45-201ENST00000435243 565 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 HSPD1P21-201ENST00000436541 245 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 MTND2P20-201ENST00000440805 661 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 Z95327.1-201ENST00000446082 482 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL133547.1-201ENST00000448546 220 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL353691.1-201ENST00000451332 387 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RPL23AP31-201ENST00000456160 467 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL590639.1-201ENST00000456484 337 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC020898.1-201ENST00000474167 787 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC017015.1-201ENST00000477387 286 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC068724.1-201ENST00000487100 792 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC023424.2-201ENST00000493479 777 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RPL21P131-201ENST00000497298 483 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC114322.1-201ENST00000506771 926 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RNU1-61P-201ENST00000516107 151 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RNY4P37-201ENST00000516225 96 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RNU1-95P-201ENST00000516357 160 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RNU1-128P-201ENST00000516704 160 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 PAICSP4-201ENST00000517543 1253 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 OR10V3P-201ENST00000525712 725 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 SLC2A13P1-201ENST00000531560 322 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC005476.1-201ENST00000554427 397 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 MTCYBP23-201ENST00000558717 1102 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC053481.3-201ENST00000577881 843 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC078899.3-201ENST00000599065 212 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL160237.3-201ENST00000604114 1013 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL022099.1-201ENST00000604551 712 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC131902.3-201ENST00000611767 581 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC243773.3-201ENST00000613270 256 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC025588.4-201ENST00000615802 908 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC022509.4-201ENST00000621404 572 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL356585.4-201ENST00000623078 1229 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 MIR200C-201ENST00000384980 68 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 MIR181B1-201ENST00000385240 110 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL590084.1-201ENST00000407885 387 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL356320.2-201ENST00000417263 507 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 SSXP9-201ENST00000417503 292 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC019178.2-201ENST00000423595 505 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 ATP5C1P1-201ENST00000441945 895 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 RPL18AP17-201ENST00000455326 198 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 SUMO2P2-201ENST00000456482 255 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC105914.1-201ENST00000511798 226 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 RNU6-583P-201ENST00000516012 92 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 ELOCP31-201ENST00000540463 467 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 MED28P6-201ENST00000558776 231 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 OR4K8P-201ENST00000578842 1048 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 RN7SL339P-201ENST00000580597 296 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 CCDC58P3-201ENST00000590792 430 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL109653.1-201ENST00000603091 248 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC106900.2-201ENST00000604994 317 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL139022.2-201ENST00000606934 443 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AL157392.4-201ENST00000609756 345 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC034229.5-201ENST00000624258 185 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 AC099654.9-201ENST00000637055 678 ntBASIC2.34□□□□□ -2.03
HLA-DQA1P01909 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQA1P01909 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HLA-DQA1P01909 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HLA-DQA1P01909 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.34□□□□□ -2.04
HLA-DQA1P01909 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.34□□□□□ -2.04
HLA-DQA1P01909 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
HLA-DQA1P01909 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms