Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RFC5P1-201ENST00000454419 874 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC092757.1-201ENST00000467293 467 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 RN7SL330P-201ENST00000469709 307 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 ST13P14-201ENST00000474095 734 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC109925.1-201ENST00000478069 331 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC108734.3-201ENST00000481241 1165 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 RPL23AP44-201ENST00000482216 473 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC093278.1-201ENST00000494700 600 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC008837.2-201ENST00000513076 418 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 RNU6-1095P-201ENST00000516148 108 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 RNU6-1261P-201ENST00000517194 104 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.42□□□□□ -1.86
PDGFBP01127 MTND2P32-201ENST00000521584 1038 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 AADACP1-206ENST00000561502 1193 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFBP01127 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC091046.2-201ENST00000620775 665 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFBP01127 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFBP01127 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFBP01127 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.41□□□□□ -1.86
PDGFBP01127 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 RNU1-18P-201ENST00000363062 164 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 Y_RNA.408-201ENST00000383987 102 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AC092447.6-201ENST00000414578 210 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AL356320.2-201ENST00000417263 507 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 YPEL5P1-201ENST00000419731 367 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AL137014.1-201ENST00000420490 1226 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 MRPS36P1-201ENST00000421291 307 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFBP01127 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 MTND2P5-201ENST00000432656 1006 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 FTH1P1-201ENST00000437933 532 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 RN7SL863P-201ENST00000462370 296 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFBP01127 VN1R104P-201ENST00000505115 1009 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AC020699.1-201ENST00000505161 445 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFBP01127 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 AC087808.1-201ENST00000520501 361 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFBP01127 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.41□□□□□ -1.86
PDGFBP01127 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFBP01127 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 MTND1P24-201ENST00000552175 861 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFBP01127 AP001330.4-201ENST00000604350 154 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AL034351.1-201ENST00000605288 668 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AC069545.1-201ENST00000605671 358 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.41□□□□□ -1.86
PDGFBP01127 AP001521.1-201ENST00000609150 300 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AL138478.1-201ENST00000612252 832 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 AC022509.4-201ENST00000621404 572 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 OR1S1-201ENST00000624470 978 ntBASIC3.41□□□□□ -1.86
PDGFBP01127 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFBP01127 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFBP01127 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PDGFBP01127 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.4□□□□□ -1.86
PDGFBP01127 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PDGFBP01127 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
PDGFBP01127 RNA5SP322-201ENST00000363617 119 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFBP01127 RHEBP3-201ENST00000411920 351 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 LUZP4P1-201ENST00000415420 344 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC007435.1-201ENST00000421086 415 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFBP01127 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.4□□□□□ -1.87
PDGFBP01127 USP9YP22-201ENST00000438971 294 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFBP01127 AL121871.1-201ENST00000443413 436 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFBP01127 AC008885.1-201ENST00000514930 301 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFBP01127 AC125611.1-201ENST00000549563 229 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC005476.1-201ENST00000554427 397 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 FAM60BP-201ENST00000578364 658 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC012669.1-201ENST00000603209 283 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC006254.3-201ENST00000603353 884 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC005332.6-201ENST00000613178 446 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 AC018692.3-201ENST00000623929 123 ntBASIC3.4□□□□□ -1.87
PDGFBP01127 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.4□□□□□ -1.87
PDGFBP01127 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDGFBP01127 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms