Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OR6C7P-201ENST00000547875 934 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.47□□□□□ -1.85
CLPTM1O96005 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.47□□□□□ -1.85
CLPTM1O96005 AL163153.1-201ENST00000554223 283 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 AC012414.6-201ENST00000568241 401 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 MIR3160-1-201ENST00000577972 85 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.47□□□□□ -1.85
CLPTM1O96005 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.47□□□□□ -1.85
CLPTM1O96005 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.47□□□□□ -1.85
CLPTM1O96005 AC073544.2-201ENST00000601155 540 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 YWHAQP7-201ENST00000603536 658 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.47□□□□□ -1.85
CLPTM1O96005 AC239868.4-201ENST00000608318 671 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 AC103591.3-201ENST00000608684 209 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLPTM1O96005 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLPTM1O96005 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLPTM1O96005 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.47□□□□□ -1.85
CLPTM1O96005 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.47□□□□□ -1.85
CLPTM1O96005 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
CLPTM1O96005 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.46□□□□□ -1.85
CLPTM1O96005 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 AL022578.1-201ENST00000439330 1433 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC092104.1-201ENST00000497346 1441 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AL136164.4-201ENST00000625013 2135 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CLPTM1O96005 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 RNU5F-7P-201ENST00000363696 115 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 RNU6-289P-201ENST00000364093 107 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 Y_RNA.553-201ENST00000384670 102 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 SNORD116-4-201ENST00000384733 96 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 MTCYBP36-201ENST00000404146 440 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AL024474.1-201ENST00000404655 591 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AC092017.2-201ENST00000427600 362 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AL353706.1-201ENST00000436728 494 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AL512286.1-201ENST00000439244 400 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.46□□□□□ -1.86
CLPTM1O96005 BX276092.4-201ENST00000452056 248 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 SNRPGP9-201ENST00000456025 225 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 HMGN2P16-201ENST00000456802 261 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 MTCO2P18-201ENST00000457151 658 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 PLGLA-201ENST00000465668 449 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 AC012181.1-201ENST00000479895 423 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.46□□□□□ -1.86
CLPTM1O96005 MTCO3P7-201ENST00000510008 774 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 RN7SKP277-201ENST00000516895 283 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 OR4A45P-201ENST00000529954 901 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC092470.1-201ENST00000546187 132 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC004024.1-201ENST00000549244 247 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AC006362.1-201ENST00000567392 174 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AP001004.1-201ENST00000582468 324 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 AC004987.4-201ENST00000603383 338 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC025588.3-201ENST00000604182 274 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC012557.2-201ENST00000605919 418 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 HULC.1-201ENST00000612720 240 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC025588.4-201ENST00000615802 908 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC098679.4-201ENST00000624241 654 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 AC112200.1-201ENST00000625015 234 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 FAM157B-203ENST00000639350 358 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 MTND5P27-201ENST00000428871 1720 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 DDX43P2-201ENST00000604753 1354 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLPTM1O96005 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLPTM1O96005 MTCO1P24-201ENST00000515438 1558 ntBASIC3.46□□□□□ -1.86
CLPTM1O96005 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.46□□□□□ -1.86
CLPTM1O96005 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL122126.1-201ENST00000546905 1318 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 MTCO1P23-201ENST00000415223 1526 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 RNU6-501P-201ENST00000364072 100 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 HMGB1P17-201ENST00000403495 628 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 HMGB1P11-201ENST00000413899 637 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 CRYBB2P1-203ENST00000415709 538 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 ZNF885P-201ENST00000420174 1098 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC006366.1-201ENST00000422002 759 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 GLRXP1-201ENST00000423261 334 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms