Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 RNU6-50P-201ENST00000362356 103 ntBASIC4.17□□□□□ -1.74
DDX58O95786 RNU6-28P-201ENST00000362378 107 ntBASIC4.17□□□□□ -1.74
DDX58O95786 RNU6-621P-201ENST00000364752 109 ntBASIC4.17□□□□□ -1.74
DDX58O95786 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 RNA5SP129-201ENST00000410276 118 ntBASIC4.17□□□□□ -1.74
DDX58O95786 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 AC063979.1-201ENST00000415539 377 ntBASIC4.17□□□□□ -1.74
DDX58O95786 ARPC3P5-201ENST00000448802 534 ntBASIC4.17□□□□□ -1.74
DDX58O95786 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX58O95786 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 AP001086.1-201ENST00000494882 321 ntBASIC4.17□□□□□ -1.74
DDX58O95786 HMGB1P22-201ENST00000505315 124 ntBASIC4.17□□□□□ -1.74
DDX58O95786 AC021146.8-201ENST00000507455 733 ntBASIC4.17□□□□□ -1.74
DDX58O95786 AC093281.2-201ENST00000510153 597 ntBASIC4.17□□□□□ -1.74
DDX58O95786 PHBP14-201ENST00000512887 367 ntBASIC4.17□□□□□ -1.74
DDX58O95786 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX58O95786 TGIF1P1-201ENST00000558095 802 ntBASIC4.17□□□□□ -1.74
DDX58O95786 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX58O95786 MIR5004-201ENST00000579078 107 ntBASIC4.17□□□□□ -1.74
DDX58O95786 MIR4644-201ENST00000579929 84 ntBASIC4.17□□□□□ -1.74
DDX58O95786 MIR3690-201ENST00000580266 75 ntBASIC4.17□□□□□ -1.74
DDX58O95786 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX58O95786 ZNF415P1-201ENST00000582279 1166 ntBASIC4.17□□□□□ -1.74
DDX58O95786 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX58O95786 VN1R78P-201ENST00000597393 564 ntBASIC4.17□□□□□ -1.74
DDX58O95786 VN1R82P-201ENST00000601481 356 ntBASIC4.17□□□□□ -1.74
DDX58O95786 BBIP1P1-201ENST00000602999 279 ntBASIC4.17□□□□□ -1.74
DDX58O95786 uc_338.1-201ENST00000612113 180 ntBASIC4.17□□□□□ -1.74
DDX58O95786 MIR8057-201ENST00000620957 69 ntBASIC4.17□□□□□ -1.74
DDX58O95786 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
DDX58O95786 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX58O95786 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
DDX58O95786 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
DDX58O95786 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX58O95786 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX58O95786 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX58O95786 HMGB1P17-201ENST00000403495 628 ntBASIC4.16□□□□□ -1.74
DDX58O95786 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 PTP4A1P5-201ENST00000420305 455 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AL137014.1-201ENST00000420490 1226 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AC099677.1-201ENST00000420575 175 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AL353678.1-201ENST00000422735 741 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 AL512649.1-201ENST00000428997 581 ntBASIC4.16□□□□□ -1.74
DDX58O95786 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX58O95786 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX58O95786 HMGB1P12-201ENST00000438594 598 ntBASIC4.16□□□□□ -1.74
DDX58O95786 SDCBPP1-201ENST00000440192 890 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
DDX58O95786 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.16□□□□□ -1.74
DDX58O95786 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX58O95786 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 ANKRD26P4-201ENST00000455755 950 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AC109925.1-201ENST00000478069 331 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AL024509.2-201ENST00000493462 493 ntBASIC4.16□□□□□ -1.74
DDX58O95786 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 AC112673.1-201ENST00000513168 575 ntBASIC4.16□□□□□ -1.74
DDX58O95786 DEFB131D-201ENST00000526803 184 ntBASIC4.16□□□□□ -1.74
DDX58O95786 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX58O95786 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.16□□□□□ -1.74
DDX58O95786 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX58O95786 RPL21P12-201ENST00000559810 515 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AC087465.1-201ENST00000560574 245 ntBASIC4.16□□□□□ -1.74
DDX58O95786 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX58O95786 AC012493.2-201ENST00000595083 291 ntBASIC4.16□□□□□ -1.74
DDX58O95786 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
DDX58O95786 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX58O95786 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX58O95786 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX58O95786 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
DDX58O95786 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
DDX58O95786 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
DDX58O95786 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
DDX58O95786 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.15□□□□□ -1.74
DDX58O95786 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX58O95786 RPL23AP57-201ENST00000332361 466 ntBASIC4.15□□□□□ -1.75
DDX58O95786 RNU1-70P-201ENST00000362618 164 ntBASIC4.15□□□□□ -1.75
DDX58O95786 RNU6-157P-201ENST00000383957 107 ntBASIC4.15□□□□□ -1.75
DDX58O95786 RPL23AP29-201ENST00000397284 453 ntBASIC4.15□□□□□ -1.75
DDX58O95786 RNU2-47P-201ENST00000410649 186 ntBASIC4.15□□□□□ -1.75
DDX58O95786 AMD1P2-201ENST00000412936 992 ntBASIC4.15□□□□□ -1.75
DDX58O95786 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX58O95786 MTCO2P21-201ENST00000419780 677 ntBASIC4.15□□□□□ -1.75
DDX58O95786 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX58O95786 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX58O95786 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX58O95786 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX58O95786 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX58O95786 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX58O95786 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX58O95786 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX58O95786 RN7SL504P-201ENST00000494496 287 ntBASIC4.15□□□□□ -1.75
DDX58O95786 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX58O95786 AC021146.5-201ENST00000503544 545 ntBASIC4.15□□□□□ -1.75
DDX58O95786 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms