Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 MIR21-201ENST00000362134 72 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 RNU6-1339P-201ENST00000363574 91 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 U8.8-201ENST00000365399 135 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTDNEP1O95476 U6.112-201ENST00000384129 70 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AL122016.1-201ENST00000403365 367 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC009963.1-201ENST00000417265 157 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC246680.2-201ENST00000422106 389 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 MTCO2P17-201ENST00000424336 677 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AL831737.1-201ENST00000441288 271 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 ELOCP13-201ENST00000443934 329 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 MTND1P33-201ENST00000446251 917 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AL929288.2-201ENST00000446368 407 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 OR51B8P-201ENST00000449892 769 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 SYPL1P1-201ENST00000473622 768 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 RNU4-29P-201ENST00000515943 174 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 RNU6-416P-201ENST00000516265 103 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 SNORD59.2-201ENST00000516873 68 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC239860.2-201ENST00000525886 270 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 SERPINE4P-201ENST00000554978 281 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC061975.8-201ENST00000587058 721 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AL138955.1-201ENST00000622881 1040 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC010297.1-201ENST00000623948 149 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AL121594.5-201ENST00000631724 573 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC006378.2-201ENST00000623178 2476 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 MTND5P28-201ENST00000438005 1594 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTDNEP1O95476 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTDNEP1O95476 FRG1BP-201ENST00000278882 761 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNU5B-1-201ENST00000363286 116 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNU5B-4P-201ENST00000363508 111 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNA5SP68-201ENST00000363885 119 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNU6-353P-201ENST00000364266 108 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 DEFA7P-201ENST00000382676 285 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNU6-1181P-201ENST00000384191 106 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 MCTS2P-201ENST00000394552 546 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AL355615.1-201ENST00000406187 641 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNA5SP184-201ENST00000411071 108 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC092638.1-201ENST00000411966 1275 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 TOMM22P1-201ENST00000418578 312 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 FCF1P1-201ENST00000432690 571 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RPS12P2-201ENST00000439728 269 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 UBE2V1P5-201ENST00000440070 405 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC092170.1-201ENST00000440211 356 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RPL17P49-201ENST00000443728 411 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CTDNEP1O95476 CDC42P1-201ENST00000456658 548 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RPS26P21-201ENST00000475397 348 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC015724.1-201ENST00000478577 156 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC004924.1-201ENST00000480160 781 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 PRELID3BP4-201ENST00000515476 571 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNU1-61P-201ENST00000516107 151 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RNU6-711P-201ENST00000517255 106 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AP004371.1-201ENST00000525240 214 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC109635.4-202ENST00000531666 412 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC011611.5-201ENST00000552477 578 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AL391156.1-201ENST00000554965 554 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC027176.1-201ENST00000560204 514 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC106782.4-201ENST00000568264 210 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC008507.2-201ENST00000588402 1176 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AL009028.1-201ENST00000604895 802 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC013468.1-201ENST00000608680 598 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC010872.1-201ENST00000624225 675 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC092608.3-201ENST00000625017 386 ntBASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTDNEP1O95476 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CTDNEP1O95476 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.86□□□□□ -1.95
CTDNEP1O95476 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL512646.1-201ENST00000269395 1077 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 MIR6073-201ENST00000352083 89 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 RNU6-7-201ENST00000364784 107 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms