Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF40O75150 AC093023.1-201ENST00000547375 507 ntBASIC6.41□□□□□ -1.38
RNF40O75150 SYF2P1-201ENST00000550658 413 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AC007956.1-201ENST00000555623 542 ntBASIC6.41□□□□□ -1.38
RNF40O75150 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF40O75150 AC067852.3-201ENST00000589177 561 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AC068768.2-201ENST00000602352 343 ntBASIC6.41□□□□□ -1.38
RNF40O75150 AC011921.3-201ENST00000605540 361 ntBASIC6.41□□□□□ -1.38
RNF40O75150 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF40O75150 U6.92-201ENST00000636464 89 ntBASIC6.41□□□□□ -1.38
RNF40O75150 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 AC114774.1-201ENST00000507410 1770 ntBASIC6.41□□□□□ -1.38
RNF40O75150 GNL2P1-201ENST00000451274 2190 ntBASIC6.41□□□□□ -1.38
RNF40O75150 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF40O75150 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF40O75150 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF40O75150 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF40O75150 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF40O75150 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RNF40O75150 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF40O75150 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF40O75150 AP005435.3-201ENST00000531260 3198 ntBASIC6.4□□□□□ -1.38
RNF40O75150 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF40O75150 RNA5SP477-201ENST00000362639 119 ntBASIC6.4□□□□□ -1.38
RNF40O75150 RNU1-130P-201ENST00000363930 160 ntBASIC6.4□□□□□ -1.38
RNF40O75150 RNU6-595P-201ENST00000363944 107 ntBASIC6.4□□□□□ -1.38
RNF40O75150 RNU6-1243P-201ENST00000364028 107 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AL109941.1-201ENST00000401925 229 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF40O75150 RPS23P10-201ENST00000416185 486 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AL160275.3-201ENST00000423876 471 ntBASIC6.4□□□□□ -1.38
RNF40O75150 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF40O75150 ACA64.1-201ENST00000459171 127 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AC008481.1-201ENST00000463278 396 ntBASIC6.4□□□□□ -1.38
RNF40O75150 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AC090602.1-201ENST00000469695 252 ntBASIC6.4□□□□□ -1.38
RNF40O75150 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF40O75150 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.4□□□□□ -1.38
RNF40O75150 TRBV5-2-201ENST00000489095 273 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AC139365.2-201ENST00000517972 253 ntBASIC6.4□□□□□ -1.38
RNF40O75150 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF40O75150 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF40O75150 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.4□□□□□ -1.38
RNF40O75150 MRPS18CP4-201ENST00000535821 231 ntBASIC6.4□□□□□ -1.38
RNF40O75150 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.4□□□□□ -1.38
RNF40O75150 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.4□□□□□ -1.38
RNF40O75150 AC005951.2-201ENST00000576282 495 ntBASIC6.4□□□□□ -1.38
RNF40O75150 MIR5696-201ENST00000578474 85 ntBASIC6.4□□□□□ -1.38
RNF40O75150 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RNF40O75150 AC005191.1-201ENST00000603950 358 ntBASIC6.4□□□□□ -1.38
RNF40O75150 MIR3976-201ENST00000606807 139 ntBASIC6.4□□□□□ -1.38
RNF40O75150 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RNF40O75150 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.4□□□□□ -1.39
RNF40O75150 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RNF40O75150 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RNF40O75150 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF40O75150 SDAD1P2-201ENST00000441308 2028 ntBASIC6.4□□□□□ -1.39
RNF40O75150 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
RNF40O75150 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
RNF40O75150 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.4□□□□□ -1.39
RNF40O75150 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RNF40O75150 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.4□□□□□ -1.39
RNF40O75150 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.39□□□□□ -1.39
RNF40O75150 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF40O75150 GTF2IP4-201ENST00000453092 2054 ntBASIC6.39□□□□□ -1.39
RNF40O75150 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 RNU6-371P-201ENST00000364283 108 ntBASIC6.39□□□□□ -1.39
RNF40O75150 RNU6-215P-201ENST00000365169 102 ntBASIC6.39□□□□□ -1.39
RNF40O75150 RNU6-637P-201ENST00000384050 107 ntBASIC6.39□□□□□ -1.39
RNF40O75150 RNA5SP284-201ENST00000384547 118 ntBASIC6.39□□□□□ -1.39
RNF40O75150 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.39□□□□□ -1.39
RNF40O75150 RNU6-1135P-201ENST00000411083 103 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.39□□□□□ -1.39
RNF40O75150 MTND6P12-201ENST00000428247 522 ntBASIC6.39□□□□□ -1.39
RNF40O75150 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 AC093414.1-201ENST00000434712 514 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF40O75150 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.39□□□□□ -1.39
RNF40O75150 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF40O75150 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.39□□□□□ -1.39
RNF40O75150 AC002553.3-201ENST00000453002 341 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AL445433.1-201ENST00000457507 257 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC087477.1-201ENST00000465747 340 ntBASIC6.39□□□□□ -1.39
RNF40O75150 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF40O75150 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.39□□□□□ -1.39
RNF40O75150 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF40O75150 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6.39□□□□□ -1.39
RNF40O75150 TRAV32-201ENST00000553993 340 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC027229.1-201ENST00000583887 253 ntBASIC6.39□□□□□ -1.39
RNF40O75150 NPIPB1P-202ENST00000588786 828 ntBASIC6.39□□□□□ -1.39
RNF40O75150 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.39□□□□□ -1.39
RNF40O75150 AC068790.4-201ENST00000602474 263 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC104465.1-201ENST00000611365 139 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC109309.2-201ENST00000612597 332 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC245014.3-201ENST00000618589 347 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC110801.1-201ENST00000623590 212 ntBASIC6.39□□□□□ -1.39
RNF40O75150 AC243829.7-201ENST00000633081 225 ntBASIC6.39□□□□□ -1.39
RNF40O75150 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms