Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Z99755.1-201ENST00000414048 380 ntBASIC3.36□□□□□ -1.87
SNX3O60493 USP9YP26-201ENST00000421008 661 ntBASIC3.36□□□□□ -1.87
SNX3O60493 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX3O60493 AL139247.1-201ENST00000422768 325 ntBASIC3.36□□□□□ -1.87
SNX3O60493 MTND4P20-201ENST00000424125 869 ntBASIC3.36□□□□□ -1.87
SNX3O60493 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX3O60493 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX3O60493 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX3O60493 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
SNX3O60493 AC092451.1-201ENST00000480211 153 ntBASIC3.36□□□□□ -1.87
SNX3O60493 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.36□□□□□ -1.87
SNX3O60493 RN7SL323P-201ENST00000494712 295 ntBASIC3.36□□□□□ -1.87
SNX3O60493 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX3O60493 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX3O60493 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX3O60493 RNU6-759P-201ENST00000516740 103 ntBASIC3.36□□□□□ -1.87
SNX3O60493 RNU6-232P-201ENST00000517144 64 ntBASIC3.36□□□□□ -1.87
SNX3O60493 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX3O60493 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX3O60493 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.36□□□□□ -1.87
SNX3O60493 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX3O60493 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX3O60493 MIR5187-201ENST00000583479 76 ntBASIC3.36□□□□□ -1.87
SNX3O60493 AC007687.1-201ENST00000602704 304 ntBASIC3.36□□□□□ -1.87
SNX3O60493 AC004223.4-201ENST00000612426 332 ntBASIC3.36□□□□□ -1.87
SNX3O60493 FP236240.3-201ENST00000623061 327 ntBASIC3.36□□□□□ -1.87
SNX3O60493 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.36□□□□□ -1.87
SNX3O60493 PCMTD1P7-201ENST00000634506 357 ntBASIC3.36□□□□□ -1.87
SNX3O60493 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SNX3O60493 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX3O60493 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SNX3O60493 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX3O60493 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX3O60493 MIR135A2-201ENST00000384854 100 ntBASIC3.35□□□□□ -1.87
SNX3O60493 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SNX3O60493 RN7SKP266-201ENST00000410232 287 ntBASIC3.35□□□□□ -1.87
SNX3O60493 RPS15AP38-201ENST00000413110 372 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 HSFY4P-201ENST00000415994 1181 ntBASIC3.35□□□□□ -1.87
SNX3O60493 SDCBPP3-201ENST00000419629 891 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AL137014.1-201ENST00000420490 1226 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC009480.2-201ENST00000422916 432 ntBASIC3.35□□□□□ -1.87
SNX3O60493 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX3O60493 AL445669.1-201ENST00000426743 755 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 VDAC1P3-201ENST00000434069 851 ntBASIC3.35□□□□□ -1.87
SNX3O60493 RSU1P2-202ENST00000437884 485 ntBASIC3.35□□□□□ -1.87
SNX3O60493 OR6K5P-201ENST00000447050 945 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AL359073.1-201ENST00000448036 403 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AP000542.1-201ENST00000448473 371 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX3O60493 AC091564.1-201ENST00000464563 479 ntBASIC3.35□□□□□ -1.87
SNX3O60493 BZW1P2-201ENST00000473537 826 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AP001025.2-201ENST00000490908 477 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC112198.1-201ENST00000505369 1220 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 CDH12P4-201ENST00000517835 295 ntBASIC3.35□□□□□ -1.87
SNX3O60493 CDH12P3-201ENST00000517935 295 ntBASIC3.35□□□□□ -1.87
SNX3O60493 CDH12P1-201ENST00000518435 295 ntBASIC3.35□□□□□ -1.87
SNX3O60493 RANP9-201ENST00000519957 271 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.35□□□□□ -1.87
SNX3O60493 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.35□□□□□ -1.87
SNX3O60493 AC007954.1-201ENST00000554198 494 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX3O60493 MIR3690-201ENST00000580266 75 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX3O60493 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX3O60493 BNIP3P23-201ENST00000599655 511 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC068790.4-201ENST00000602474 263 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC068313.1-201ENST00000604028 1008 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC025811.1-201ENST00000604312 472 ntBASIC3.35□□□□□ -1.87
SNX3O60493 ARF4P1-201ENST00000605447 541 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC092354.2-201ENST00000607786 514 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC107214.2-201ENST00000608204 634 ntBASIC3.35□□□□□ -1.87
SNX3O60493 AC103710.4-201ENST00000609301 899 ntBASIC3.35□□□□□ -1.87
SNX3O60493 Z99129.2-201ENST00000619967 314 ntBASIC3.35□□□□□ -1.87
SNX3O60493 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX3O60493 AC092192.1-201ENST00000633154 1018 ntBASIC3.35□□□□□ -1.87
SNX3O60493 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX3O60493 GABPAP-201ENST00000419271 1356 ntBASIC3.35□□□□□ -1.87
SNX3O60493 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNX3O60493 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNX3O60493 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX3O60493 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX3O60493 MTND5P19-201ENST00000424872 1794 ntBASIC3.34□□□□□ -1.87
SNX3O60493 FRG1BP-201ENST00000278882 761 ntBASIC3.34□□□□□ -1.87
SNX3O60493 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNX3O60493 RNU6-500P-201ENST00000362349 107 ntBASIC3.34□□□□□ -1.87
SNX3O60493 RNU6-97P-201ENST00000363387 104 ntBASIC3.34□□□□□ -1.87
SNX3O60493 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX3O60493 MIR585-201ENST00000384887 94 ntBASIC3.34□□□□□ -1.87
SNX3O60493 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SNX3O60493 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX3O60493 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX3O60493 HMGB1P11-201ENST00000413899 637 ntBASIC3.34□□□□□ -1.87
SNX3O60493 RPL23AP39-201ENST00000415533 405 ntBASIC3.34□□□□□ -1.87
SNX3O60493 RPL26P29-201ENST00000415623 438 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms