Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 RPS27AP14-201ENST00000422868 454 ntBASIC3.5□□□□□ -1.85
SSX4O60224 OR5BE1P-201ENST00000425977 939 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AL691449.1-201ENST00000426570 421 ntBASIC3.5□□□□□ -1.85
SSX4O60224 MED14P1-201ENST00000430517 648 ntBASIC3.5□□□□□ -1.85
SSX4O60224 KCTD9P3-201ENST00000434597 1169 ntBASIC3.5□□□□□ -1.85
SSX4O60224 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SSX4O60224 EPS15P1-201ENST00000448836 336 ntBASIC3.5□□□□□ -1.85
SSX4O60224 RPL36AP33-201ENST00000450395 310 ntBASIC3.5□□□□□ -1.85
SSX4O60224 MRPS31P2-201ENST00000451581 518 ntBASIC3.5□□□□□ -1.85
SSX4O60224 CFTRP1-201ENST00000456646 183 ntBASIC3.5□□□□□ -1.85
SSX4O60224 SNORD121B-201ENST00000458838 81 ntBASIC3.5□□□□□ -1.85
SSX4O60224 RNA5SP246-201ENST00000458909 119 ntBASIC3.5□□□□□ -1.85
SSX4O60224 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 SNRPGP3-201ENST00000469405 227 ntBASIC3.5□□□□□ -1.85
SSX4O60224 TMED11P-201ENST00000479478 690 ntBASIC3.5□□□□□ -1.85
SSX4O60224 PPIAP15-201ENST00000479662 484 ntBASIC3.5□□□□□ -1.85
SSX4O60224 RPL31P13-201ENST00000484151 370 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC109486.1-201ENST00000486833 374 ntBASIC3.5□□□□□ -1.85
SSX4O60224 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.5□□□□□ -1.85
SSX4O60224 RPL7P24-201ENST00000493052 752 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC096751.1-202ENST00000502691 1067 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 AC093534.1-201ENST00000504977 132 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC006499.5-201ENST00000505037 514 ntBASIC3.5□□□□□ -1.85
SSX4O60224 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 RNU2-58P-201ENST00000516403 183 ntBASIC3.5□□□□□ -1.85
SSX4O60224 RNU6-528P-201ENST00000516926 100 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 OR5D17P-201ENST00000531492 978 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 HSPE1P5-201ENST00000561489 272 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 MIR4307-201ENST00000582802 84 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AF131215.7-201ENST00000602443 707 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AP000403.1-201ENST00000603349 851 ntBASIC3.5□□□□□ -1.85
SSX4O60224 PRELID3BP8-201ENST00000604148 295 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC011451.2-201ENST00000604303 598 ntBASIC3.5□□□□□ -1.85
SSX4O60224 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX4O60224 RMST_8.1-201ENST00000610287 165 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AL590282.1-201ENST00000610379 1136 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC015967.1-201ENST00000619893 476 ntBASIC3.5□□□□□ -1.85
SSX4O60224 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC112200.1-201ENST00000625015 234 ntBASIC3.5□□□□□ -1.85
SSX4O60224 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX4O60224 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 OR5BE1P-202ENST00000641168 1176 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AF127577.6-201ENST00000623352 2191 ntBASIC3.5□□□□□ -1.85
SSX4O60224 AC010733.2-201ENST00000589496 5702 ntBASIC3.5□□□□□ -1.85
SSX4O60224 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SSX4O60224 PRO1804-201ENST00000623780 2050 ntBASIC3.5□□□□□ -1.85
SSX4O60224 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX4O60224 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSX4O60224 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSX4O60224 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.49□□□□□ -1.85
SSX4O60224 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SSX4O60224 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSX4O60224 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX4O60224 AC116667.1-201ENST00000604855 2072 ntBASIC3.49□□□□□ -1.85
SSX4O60224 FRG1BP-201ENST00000278882 761 ntBASIC3.49□□□□□ -1.85
SSX4O60224 MT-TH-201ENST00000387441 69 ntBASIC3.49□□□□□ -1.85
SSX4O60224 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSX4O60224 HSPE1P8-201ENST00000406997 288 ntBASIC3.49□□□□□ -1.85
SSX4O60224 RNU2-37P-201ENST00000410695 177 ntBASIC3.49□□□□□ -1.85
SSX4O60224 OR1AA1P-201ENST00000419597 916 ntBASIC3.49□□□□□ -1.85
SSX4O60224 BEND7P1-201ENST00000422058 457 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX4O60224 GOT2P5-201ENST00000433995 546 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.49□□□□□ -1.85
SSX4O60224 RPS4XP4-201ENST00000443195 763 ntBASIC3.49□□□□□ -1.85
SSX4O60224 FAM103A2P-201ENST00000444122 354 ntBASIC3.49□□□□□ -1.85
SSX4O60224 RPL7P36-201ENST00000444633 681 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 AC078785.3-201ENST00000476607 425 ntBASIC3.49□□□□□ -1.85
SSX4O60224 UBE2CP3-201ENST00000502715 450 ntBASIC3.49□□□□□ -1.85
SSX4O60224 DSTNP2-201ENST00000504533 515 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 AC004062.1-201ENST00000509926 645 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX4O60224 RN7SKP244-201ENST00000516513 307 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.49□□□□□ -1.85
SSX4O60224 AL121766.1-201ENST00000547436 487 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX4O60224 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.49□□□□□ -1.85
SSX4O60224 RPL23AP87-202ENST00000573039 466 ntBASIC3.49□□□□□ -1.85
SSX4O60224 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX4O60224 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms