Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MIR3133-201ENST00000583157 78 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC068790.4-201ENST00000602474 263 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 IMMP1LP3-201ENST00000604197 224 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC010900.2-201ENST00000604508 210 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXA2O43364 AL138960.1-201ENST00000613838 513 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 AC090607.5-201ENST00000615692 224 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXA2O43364 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HOXA2O43364 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 AC026523.2-201ENST00000625039 7739 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXA2O43364 AC005183.1-201ENST00000603687 1979 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 SRRM1P3-201ENST00000426911 2678 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA2O43364 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 BTBD10P1-201ENST00000549824 1352 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA2O43364 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXA2O43364 AL159987.1-201ENST00000347911 293 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 Y_RNA.84-201ENST00000363011 104 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 Y_RNA.105-201ENST00000363182 111 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 RNU6-378P-201ENST00000384324 107 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 MT-TC-201ENST00000387405 66 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 CYB5AP4-201ENST00000396692 399 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 RPS26P47-201ENST00000427219 348 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA2O43364 AC092423.1-201ENST00000430165 186 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA2O43364 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA2O43364 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXA2O43364 MIR2117-201ENST00000516780 80 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 AC126177.3-201ENST00000551839 688 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA2O43364 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA2O43364 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA2O43364 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA2O43364 MIR6837-201ENST00000620884 64 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 AL031601.2-202ENST00000622650 282 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXA2O43364 AC132825.6-201ENST00000638861 357 ntBASIC6.23□□□□□ -1.41
HOXA2O43364 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA2O43364 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HOXA2O43364 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXA2O43364 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXA2O43364 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HOXA2O43364 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HOXA2O43364 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA2O43364 AC068870.1-201ENST00000563737 2455 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA2O43364 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
HOXA2O43364 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 SMG1P6-201ENST00000532337 2930 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 Y_RNA.65-201ENST00000362846 100 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 U3.7-201ENST00000363668 216 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNU6-288P-201ENST00000363690 104 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNU6-371P-201ENST00000364283 108 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 Y_RNA.237-201ENST00000364439 102 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNA5SP131-201ENST00000365452 119 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNU6-48P-201ENST00000384161 107 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 SNORA69.1-201ENST00000390904 137 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNU6-821P-201ENST00000390995 107 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HOXA2O43364 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 MIR1286-201ENST00000408112 78 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNA5SP36-201ENST00000410197 133 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RNU6-121P-201ENST00000410525 99 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA2O43364 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXA2O43364 CFL1P1-202ENST00000432948 411 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA2O43364 AC100832.1-201ENST00000471945 383 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 COPS8P2-201ENST00000473228 627 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA2O43364 RPS17P5-201ENST00000498293 408 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 AC087369.1-201ENST00000520775 996 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.22□□□□□ -1.41
HOXA2O43364 AC006557.5-201ENST00000603126 811 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 MIR8080-201ENST00000622224 89 ntBASIC6.22□□□□□ -1.41
HOXA2O43364 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXA2O43364 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA2O43364 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA2O43364 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms