Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC107871.2-201ENST00000612894 502 ntBASIC4.12□□□□□ -1.75
CUX2O14529 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.12□□□□□ -1.75
CUX2O14529 MIR1291-201ENST00000627649 87 ntBASIC4.12□□□□□ -1.75
CUX2O14529 AC090897.3-201ENST00000636973 1157 ntBASIC4.12□□□□□ -1.75
CUX2O14529 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CUX2O14529 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CUX2O14529 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 RPL7P29-201ENST00000437151 728 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC010468.3-201ENST00000508225 458 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.11□□□□□ -1.75
CUX2O14529 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.11□□□□□ -1.75
CUX2O14529 OR8K2P-201ENST00000524645 927 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.11□□□□□ -1.75
CUX2O14529 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CUX2O14529 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CUX2O14529 AL592437.2-201ENST00000421655 2434 ntBASIC4.11□□□□□ -1.75
CUX2O14529 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CUX2O14529 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.11□□□□□ -1.75
CUX2O14529 METTL21EP-201ENST00000298105 713 ntBASIC4.11□□□□□ -1.75
CUX2O14529 RNU6-1140P-201ENST00000410517 106 ntBASIC4.11□□□□□ -1.75
CUX2O14529 LINC01347-201ENST00000417964 355 ntBASIC4.11□□□□□ -1.75
CUX2O14529 USP9YP20-201ENST00000419224 558 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC023128.2-201ENST00000420880 1223 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 AC068305.1-201ENST00000497406 726 ntBASIC4.11□□□□□ -1.75
CUX2O14529 TRMT112P2-201ENST00000512910 132 ntBASIC4.11□□□□□ -1.75
CUX2O14529 SNORD116-26-201ENST00000516006 96 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 VTA1P2-201ENST00000520205 911 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CUX2O14529 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CUX2O14529 AC084757.1-201ENST00000559987 490 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC090751.1-201ENST00000566966 267 ntBASIC4.11□□□□□ -1.75
CUX2O14529 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.11□□□□□ -1.75
CUX2O14529 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.11□□□□□ -1.75
CUX2O14529 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.11□□□□□ -1.75
CUX2O14529 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.11□□□□□ -1.75
CUX2O14529 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUX2O14529 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CUX2O14529 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUX2O14529 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CUX2O14529 SNORA51.4-201ENST00000364993 124 ntBASIC4.1□□□□□ -1.75
CUX2O14529 RNU6-98P-201ENST00000384173 107 ntBASIC4.1□□□□□ -1.75
CUX2O14529 AL138785.1-201ENST00000425821 331 ntBASIC4.1□□□□□ -1.75
CUX2O14529 MTND4P15-201ENST00000437913 1033 ntBASIC4.1□□□□□ -1.75
CUX2O14529 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.1□□□□□ -1.75
CUX2O14529 MTCO3P11-201ENST00000455103 774 ntBASIC4.1□□□□□ -1.75
CUX2O14529 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.1□□□□□ -1.75
CUX2O14529 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.1□□□□□ -1.75
CUX2O14529 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.1□□□□□ -1.75
CUX2O14529 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.1□□□□□ -1.75
CUX2O14529 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.1□□□□□ -1.75
CUX2O14529 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.1□□□□□ -1.75
CUX2O14529 AC027104.1-201ENST00000563702 681 ntBASIC4.1□□□□□ -1.75
CUX2O14529 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CUX2O14529 KATNBL1P5-201ENST00000605015 517 ntBASIC4.1□□□□□ -1.75
CUX2O14529 AP001521.1-201ENST00000609150 300 ntBASIC4.1□□□□□ -1.75
CUX2O14529 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.1□□□□□ -1.75
CUX2O14529 AP003072.4-201ENST00000624580 310 ntBASIC4.1□□□□□ -1.75
CUX2O14529 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.1□□□□□ -1.75
CUX2O14529 FRG1DP-201ENST00000635586 771 ntBASIC4.1□□□□□ -1.75
CUX2O14529 AC083865.1-201ENST00000636634 831 ntBASIC4.1□□□□□ -1.75
CUX2O14529 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUX2O14529 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUX2O14529 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CUX2O14529 RNU1-100P-201ENST00000365255 165 ntBASIC4.09□□□□□ -1.75
CUX2O14529 MIR613-201ENST00000385248 95 ntBASIC4.09□□□□□ -1.75
CUX2O14529 RN7SKP32-201ENST00000410167 303 ntBASIC4.09□□□□□ -1.75
CUX2O14529 RPL30P3-201ENST00000424262 333 ntBASIC4.09□□□□□ -1.75
CUX2O14529 MORF4L1P7-201ENST00000426038 703 ntBASIC4.09□□□□□ -1.75
CUX2O14529 DNAJC19P4-201ENST00000440115 345 ntBASIC4.09□□□□□ -1.75
CUX2O14529 ARL5AP2-201ENST00000444698 533 ntBASIC4.09□□□□□ -1.75
CUX2O14529 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CUX2O14529 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.09□□□□□ -1.75
CUX2O14529 AC025768.1-201ENST00000510057 267 ntBASIC4.09□□□□□ -1.75
CUX2O14529 AC026412.2-201ENST00000512270 1075 ntBASIC4.09□□□□□ -1.75
CUX2O14529 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.09□□□□□ -1.75
CUX2O14529 AC090819.1-201ENST00000523800 1111 ntBASIC4.09□□□□□ -1.75
CUX2O14529 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.09□□□□□ -1.75
CUX2O14529 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.09□□□□□ -1.75
CUX2O14529 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CUX2O14529 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CUX2O14529 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC4.08□□□□□ -1.76
CUX2O14529 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CUX2O14529 RNU6-252P-201ENST00000363232 107 ntBASIC4.08□□□□□ -1.76
CUX2O14529 NDUFB4P5-201ENST00000415445 361 ntBASIC4.08□□□□□ -1.76
CUX2O14529 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CUX2O14529 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.08□□□□□ -1.76
CUX2O14529 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.08□□□□□ -1.76
CUX2O14529 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.08□□□□□ -1.76
CUX2O14529 RPL7P31-201ENST00000450192 724 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms