Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC245036.5-201ENST00000596330 847 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC063944.3-201ENST00000609969 533 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 CYP3A51P-201ENST00000633513 256 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR1322-201ENST00000638013 71 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 GDI2P1-201ENST00000429312 1336 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR422A-201ENST00000362286 90 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU6-263P-201ENST00000363811 107 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 SNORD82-201ENST00000365530 70 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU6-157P-201ENST00000383957 107 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 Y_RNA.493-201ENST00000384422 102 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR1250-201ENST00000408098 113 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 TIMM9P2-201ENST00000419324 266 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC006548.1-201ENST00000427470 102 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC010468.1-201ENST00000461022 817 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RPS15AP17-201ENST00000470598 390 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RN7SKP287-201ENST00000516546 266 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU5A-4P-201ENST00000516588 111 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC010198.2-201ENST00000550612 259 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 HSPE1P3-201ENST00000559254 309 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AL669831.4-202ENST00000590817 238 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC022022.2-201ENST00000602989 360 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC093424.1-201ENST00000604999 338 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AP000484.1-201ENST00000620067 1252 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AP002782.1-201ENST00000623107 614 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC018692.3-201ENST00000623929 123 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 CR381572.1-201ENST00000625098 102 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 AC138649.5-201ENST00000637456 137 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 PWAR6-201ENST00000552334 4618 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 MTND5P24-201ENST00000438892 1767 ntBASIC3.3□□□□□ -1.88
NEDD8-MDP1E9PL57 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 MTND4P34-201ENST00000572715 1371 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL23AP57-201ENST00000332361 466 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RNVU1-3-201ENST00000364313 161 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 U3.29-201ENST00000391296 212 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL31P1-201ENST00000398116 372 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RSL24D1P4-201ENST00000400938 484 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RNA5SP229-201ENST00000410809 99 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 HIGD1AP15-201ENST00000416198 280 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC244098.2-201ENST00000422068 99 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AL139421.1-201ENST00000423010 169 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL23AP69-201ENST00000431134 458 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 MTND1P32-201ENST00000433043 938 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AL353705.1-201ENST00000433468 480 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 SETP5-201ENST00000437270 562 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AL445669.2-201ENST00000454425 421 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 HMGB3P30-201ENST00000457863 606 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC078817.1-201ENST00000492623 435 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC006499.2-201ENST00000513470 337 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms