Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF223E7ERA6 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF223E7ERA6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF223E7ERA6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF223E7ERA6 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF223E7ERA6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF223E7ERA6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF223E7ERA6 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF223E7ERA6 AL359976.1-201ENST00000418655 3528 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 RNU5A-1-201ENST00000362698 116 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 Y_RNA.116-201ENST00000363292 103 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RN7SKP81-201ENST00000365603 331 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RNU6-1286P-201ENST00000383871 107 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 MIR10A-201ENST00000385043 110 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RNY4P30-201ENST00000410216 95 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC008753.1-201ENST00000423096 284 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 DEFA11P-201ENST00000446470 261 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC098847.1-201ENST00000473094 348 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RPL36AP41-201ENST00000493820 306 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RPS10P20-201ENST00000494130 463 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RPL31P61-201ENST00000496160 376 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC079905.1-201ENST00000549280 475 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AP001264.1-201ENST00000620602 703 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 snoZ196.1-201ENST00000625269 89 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 MAPK10-365ENST00000641902 3825 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC027575.3-201ENST00000583058 2747 ntBASIC5.41□□□□□ -1.54
RNF223E7ERA6 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF223E7ERA6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNF223E7ERA6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC092821.3-202ENST00000641304 2767 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC009237.3-203ENST00000442128 3551 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC020658.2-201ENST00000559030 4020 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF223E7ERA6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 RNU6-32P-201ENST00000383948 107 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 RNU6-13P-201ENST00000384248 107 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 RNU6-12P-201ENST00000384604 107 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 RNU6-41P-201ENST00000384741 107 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AL158823.1-201ENST00000418441 478 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 BPY2DP-201ENST00000422208 265 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 CRYGGP-201ENST00000443337 145 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 HLA-DPA3-207ENST00000454398 229 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 Y_RNA.637-201ENST00000459424 114 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 RN7SL174P-201ENST00000475578 289 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 LSM3P4-201ENST00000502948 309 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC004980.4-201ENST00000513375 203 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC010265.1-201ENST00000513509 211 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC010463.3-201ENST00000594077 500 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC024153.1-201ENST00000603103 365 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC092266.1-201ENST00000610958 165 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms