Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC090312.2-201ENST00000582687 378 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC245036.5-201ENST00000596330 847 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC113368.1-201ENST00000603736 382 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC007349.4-201ENST00000608114 532 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MIR7112-201ENST00000616126 65 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AL157770.1-201ENST00000623049 439 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC026422.1-201ENST00000623961 452 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 FAM157B-203ENST00000639350 358 ntBASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TRIM49D1C9J1S8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 RNU5D-1-201ENST00000363299 116 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AL133264.1-201ENST00000407157 562 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 SNORA11.1-201ENST00000408133 129 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 RN7SKP220-201ENST00000410611 288 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC068533.2-201ENST00000411872 306 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 NUP35P2-201ENST00000416748 943 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AL158156.1-201ENST00000422509 473 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 SEPT7P5-201ENST00000434048 306 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 YWHAZP7-201ENST00000436906 631 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 COX7BP2-201ENST00000437976 242 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 snoU13.7-201ENST00000459220 104 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 RPL23AP11-201ENST00000475260 469 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC069528.1-202ENST00000482888 637 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 RN7SKP31-201ENST00000516354 278 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 RN7SKP244-201ENST00000516513 307 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 RN7SKP277-201ENST00000516895 283 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 MTCO2P15-201ENST00000532655 656 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 MTND4P33-201ENST00000556706 766 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC009097.3-201ENST00000563557 1018 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC138915.2-201ENST00000569776 97 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 LARP7P2-201ENST00000575306 125 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 SNORD39.3-201ENST00000584451 71 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC016877.3-201ENST00000606778 504 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC131235.4-201ENST00000609288 620 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC022509.4-201ENST00000621404 572 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC022079.1-201ENST00000621546 602 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 AC017037.3-201ENST00000625016 472 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 OR5BR1P-201ENST00000524992 1330 ntBASIC2.89□□□□□ -1.95
TRIM49D1C9J1S8 MTND5P1-201ENST00000445440 1375 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 MTND4P34-201ENST00000572715 1371 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 NACA3P-201ENST00000359690 648 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 RNU6-600P-201ENST00000362524 99 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 RNU6-761P-201ENST00000384148 107 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 DSTNP4-201ENST00000399472 474 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 EIF5P1-201ENST00000400019 1231 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL355379.1-201ENST00000405542 640 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL450338.1-201ENST00000407987 512 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 HIGD1AP15-201ENST00000416198 280 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 Z75741.2-201ENST00000417272 1167 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AC092634.6-201ENST00000418558 192 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AC011233.1-201ENST00000422812 283 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL590103.1-201ENST00000434488 307 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL590399.6-201ENST00000446396 307 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 RPL36AP33-201ENST00000450395 310 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 RPL21P104-201ENST00000464143 478 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL136126.1-201ENST00000473603 402 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 OR4G11P-201ENST00000492842 939 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 SNORA48.10-201ENST00000516965 160 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 MTND2P26-201ENST00000528255 1029 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 DUXAP5-201ENST00000529668 529 ntBASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49D1C9J1S8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms