Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MFSD8-242ENST00000641690 4199 ntBASIC4.43□□□□□ -1.7
CCDC78A2IDD5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC78A2IDD5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
CCDC78A2IDD5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC78A2IDD5 AC024560.2-201ENST00000507981 1497 ntBASIC4.43□□□□□ -1.7
CCDC78A2IDD5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC139713.2-214ENST00000642059 1811 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 Y_RNA.61-201ENST00000362835 102 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 RNU6-343P-201ENST00000364709 104 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC068538.1-201ENST00000376856 336 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC097374.1-203ENST00000400783 485 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 LAP3P1-201ENST00000403648 294 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AL139095.3-201ENST00000419672 1203 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 RPL31P35-201ENST00000431058 377 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 SDCBPP1-201ENST00000440192 890 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 RPL23AP33-201ENST00000442301 452 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC009963.2-201ENST00000453431 138 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 HMGB1P15-201ENST00000453854 435 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 RPS20P32-201ENST00000456044 356 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 RPL36AP51-201ENST00000487216 318 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC084783.1-201ENST00000565846 910 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC009101.1-201ENST00000568135 242 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 MIR4715-201ENST00000584117 79 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 MIR98-201ENST00000606724 119 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AL596245.1-201ENST00000618994 362 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC009268.2-201ENST00000621925 457 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC139792.3-201ENST00000623525 224 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 AC025031.4-201ENST00000621248 3271 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC78A2IDD5 KPNA2P2-201ENST00000419546 1489 ntBASIC4.42□□□□□ -1.7
CCDC78A2IDD5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNA5SP307-201ENST00000362863 116 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-1090P-201ENST00000364065 94 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-853P-201ENST00000364306 107 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-359P-201ENST00000365466 108 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-483P-201ENST00000384088 108 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-780P-201ENST00000391030 104 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-195P-201ENST00000411352 109 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC127391.1-201ENST00000411737 98 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC108734.1-201ENST00000439549 399 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 USP9YP8-201ENST00000441913 500 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 FGF7P3-201ENST00000454645 303 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RPS26P28-201ENST00000470806 348 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AL136126.1-201ENST00000473603 402 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC008628.2-201ENST00000502605 298 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 RNU6-1281P-201ENST00000516223 105 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC090151.1-201ENST00000520784 730 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AP003181.2-201ENST00000528941 181 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC009643.1-201ENST00000532030 391 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC78A2IDD5 AC090615.1-201ENST00000577519 154 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 MIR4277-201ENST00000578298 84 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 MIR4284-201ENST00000578924 81 ntBASIC4.41□□□□□ -1.7
CCDC78A2IDD5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms