Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CR383658.2-201ENST00000547576 1525 ntBASIC3.23□□□□□ -1.89
TRBV4-1A0A0J9YWV2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.23□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC006378.2-201ENST00000623178 2476 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL513302.2-201ENST00000562313 1842 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SNORA7.2-201ENST00000364446 145 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SNORD116-2-201ENST00000384274 95 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU6-769P-201ENST00000384407 104 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SNORD116-6-201ENST00000384711 96 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPL32P23-201ENST00000397237 405 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RNU2-47P-201ENST00000410649 186 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MTCO1P17-201ENST00000411522 491 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 TPMTP3-201ENST00000411928 735 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPS7P15-201ENST00000415804 584 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RAD23BP2-201ENST00000416003 1207 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SETP8-201ENST00000435341 628 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC091862.1-201ENST00000438016 1100 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL138799.3-201ENST00000438968 350 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL512286.1-201ENST00000439244 400 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CDC27P1-201ENST00000445384 715 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPS24P6-201ENST00000452670 400 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CFTRP1-201ENST00000456646 183 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SNORD121B-201ENST00000458838 81 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC005921.1-201ENST00000510589 286 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC026402.1-201ENST00000513642 170 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AP003497.1-201ENST00000528472 562 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC087481.2-201ENST00000565492 330 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC053481.4-201ENST00000583164 216 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC110760.3-201ENST00000598794 467 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AP000403.1-201ENST00000603349 851 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 CRYM-AS1-204ENST00000637983 556 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC119674.1-207ENST00000641355 633 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.22□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
TRBV4-1A0A0J9YWV2 AC007823.1-201ENST00000569932 1566 ntBASIC3.21□□□□□ -1.89
TRBV4-1A0A0J9YWV2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 Y_RNA.97-201ENST00000363094 102 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU6-1155P-201ENST00000363554 107 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RNU6-1207P-201ENST00000384343 107 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL356421.1-201ENST00000403255 413 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 DBIP2-201ENST00000419076 262 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RPL31P12-201ENST00000422587 358 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AP000907.1-201ENST00000428428 510 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL831737.1-201ENST00000441288 271 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 UBE2D3P4-201ENST00000441973 436 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ZNF114P1-201ENST00000453500 292 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR6K1P-201ENST00000456766 971 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC010468.1-201ENST00000461022 817 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AP001025.2-201ENST00000490908 477 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC093534.1-201ENST00000504977 132 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC006499.5-201ENST00000505037 514 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR5BM1P-201ENST00000512021 366 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC023141.12-201ENST00000512399 199 ntBASIC3.21□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms