Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC096751.1-202ENST00000502691 1067 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AC004062.1-201ENST00000509926 645 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AC112673.1-201ENST00000513168 575 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 SNORA31.8-201ENST00000516327 108 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 EIF1AXP2-201ENST00000555940 413 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 COX6CP3-201ENST00000580869 223 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 MIR4513-201ENST00000581077 86 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AL355812.1-201ENST00000603215 216 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 HSPE1P14-201ENST00000605812 302 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AC104237.2-201ENST00000612456 443 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 VN1R7P-201ENST00000619242 903 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AC092608.2-201ENST00000624427 218 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 AL356118.1-201ENST00000635272 1078 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.94□□□□□ -2.1
TRAV3A0A0B4J244 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 RNU6-989P-201ENST00000362756 107 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 Y_RNA.493-201ENST00000384422 102 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 BOLA3P4-201ENST00000418151 400 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 MTCO1P57-201ENST00000432182 261 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AL645638.1-201ENST00000440519 361 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC090543.1-201ENST00000492168 485 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 SETP12-201ENST00000514068 805 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 RNU6-488P-201ENST00000515918 99 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 RNA5SP402-201ENST00000517148 110 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AP003467.2-201ENST00000520175 319 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 ERHP1-201ENST00000523006 310 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 MIR4319-201ENST00000577285 85 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC022387.2-201ENST00000604050 448 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 DPRXP5-201ENST00000604662 539 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC019159.1-201ENST00000605094 187 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC128687.1-201ENST00000605304 619 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC004775.1-201ENST00000607389 753 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 MIR6076-201ENST00000617521 113 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 STMN1P1-201ENST00000617809 440 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV3A0A0B4J244 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 Y_RNA.500-201ENST00000384466 111 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 RNU6-1151P-201ENST00000384684 107 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 SSXP10-201ENST00000402595 565 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC019097.1-201ENST00000424783 735 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 MTCO1P39-201ENST00000426148 480 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC063976.3-201ENST00000426849 329 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC114973.1-201ENST00000429057 632 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC004865.1-201ENST00000442276 1003 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC104389.3-201ENST00000445629 235 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AL513328.1-201ENST00000446460 224 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 RPS29P12-201ENST00000460178 152 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AP001486.1-201ENST00000463339 476 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC015724.1-201ENST00000478577 156 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AL049873.1-201ENST00000480540 376 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC096576.1-201ENST00000489014 359 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 VN1R104P-201ENST00000505115 1009 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC026436.1-201ENST00000510537 270 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC025881.1-201ENST00000518851 512 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms