Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 ELOCP13-201ENST00000443934 329 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC044797.1-201ENST00000445744 679 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 NPM1P13-201ENST00000452663 865 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 snoU13.24-201ENST00000458998 104 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 RNU7-27P-201ENST00000459281 62 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 RNA5SP471-201ENST00000516971 106 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 HMGN1P28-201ENST00000521340 364 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AL049838.1-201ENST00000563647 981 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 MIR4319-201ENST00000577285 85 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 COX6CP3-201ENST00000580869 223 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC008739.2-201ENST00000597006 317 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AC120053.1-201ENST00000607706 736 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 CTSLP2-204ENST00000629029 392 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 HMGB1P5-201ENST00000255320 642 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 RNU6-1181P-201ENST00000384191 106 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 RNA5SP252-201ENST00000391131 119 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AC096533.1-201ENST00000411645 353 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AC009963.1-201ENST00000417265 157 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AC096632.1-201ENST00000427395 310 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 IFNA11P-201ENST00000446352 526 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AL035407.2-201ENST00000454090 378 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AC025768.1-201ENST00000510057 267 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 HIGD1AP3-201ENST00000515857 278 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AMZ2P1-203ENST00000565833 850 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 U73023.1-201ENST00000603134 700 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 AC104307.1-201ENST00000616142 196 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 RPL23AP61-201ENST00000623642 466 ntBASIC1.89□□□□□ -2.11
AP4S1Q9Y587 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.89□□□□□ -2.11
AP4S1Q9Y587 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AP002784.2-201ENST00000397300 549 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 RNA5SP184-201ENST00000411071 108 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 NUP35P1-201ENST00000422734 947 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 OR51AB1P-201ENST00000429046 620 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 MTCYBP45-201ENST00000435243 565 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 RN7SL432P-201ENST00000484057 298 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC105914.1-201ENST00000511798 226 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC009127.3-201ENST00000570531 403 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.88□□□□□ -2.11
AP4S1Q9Y587 MIR4658-201ENST00000584344 65 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC115085.1-201ENST00000588924 229 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AL442067.2-201ENST00000614033 363 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC011472.4-201ENST00000615848 491 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC245389.2-201ENST00000616023 576 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC243756.2-201ENST00000618406 463 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC242843.1-201ENST00000618702 573 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC020923.1-201ENST00000624021 917 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
AP4S1Q9Y587 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 MTND4P35-201ENST00000604257 1375 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 Z99127.2-201ENST00000441426 334 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 RPL31P20-201ENST00000449593 360 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 TPMTP4-201ENST00000450749 678 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC108938.1-201ENST00000451204 136 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 BX276092.4-201ENST00000452056 248 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AL109933.2-201ENST00000452651 260 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 CAB39P1-201ENST00000502277 460 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 RNU2-44P-201ENST00000516795 194 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC109329.2-201ENST00000519658 482 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 ERHP1-201ENST00000523006 310 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 MIR4429-201ENST00000580105 73 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms