Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 HMGN2P35-201ENST00000412164 270 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RPS20P25-201ENST00000412447 352 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RPS6P14-201ENST00000425165 719 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC025750.2-201ENST00000442609 450 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 HMGN3P1-201ENST00000453847 193 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC027673.1-201ENST00000456245 405 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RNA5SP310-201ENST00000459084 116 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 CABYRP1-201ENST00000465493 1045 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC006445.2-201ENST00000510061 472 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC096725.1-201ENST00000514266 313 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC022069.1-201ENST00000582910 658 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 VN1R88P-201ENST00000596787 292 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC068722.2-201ENST00000618734 544 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 FRG1DP-201ENST00000635586 771 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AL590396.2-201ENST00000636511 1041 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 Z82195.2-201ENST00000612348 18351 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC109315.1-201ENST00000584143 1347 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AL161431.1-201ENST00000618966 4205 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 SNORD21-201ENST00000383953 95 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-921P-201ENST00000384361 107 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 MIR649-201ENST00000384843 97 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 MIR592-201ENST00000384959 97 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-712P-201ENST00000410558 100 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC009237.2-201ENST00000421358 284 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC019097.1-201ENST00000424783 735 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RPP40P1-201ENST00000426762 456 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC063976.3-201ENST00000426849 329 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RPS26P30-201ENST00000443431 335 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 Z96811.1-201ENST00000445880 108 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 VN1R104P-201ENST00000505115 1009 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC104108.1-201ENST00000509930 412 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC034159.1-201ENST00000513885 583 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 SNRPGP16-201ENST00000533275 226 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC093014.1-201ENST00000548926 724 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC125611.2-201ENST00000551907 647 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AP001330.4-201ENST00000604350 154 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RPL23AP88-201ENST00000605759 454 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 MIR6076-201ENST00000617521 113 ntBASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HDGFL3Q9Y3E1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 CUL1P1-201ENST00000509510 2425 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 U3.26-201ENST00000391236 204 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 UBE2V1P11-201ENST00000411559 285 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 RPL19P1-201ENST00000411635 428 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 RAP1BP1-201ENST00000412709 553 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 AC099677.1-201ENST00000420575 175 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 AC079780.1-201ENST00000428259 207 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 AL831737.1-201ENST00000441288 271 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 MRPL50P4-201ENST00000446432 475 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 SNORD109B-201ENST00000458961 67 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 SNORD109A-201ENST00000459128 67 ntBASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.37□□□□□ -2.03
HDGFL3Q9Y3E1 AC096576.1-201ENST00000489014 359 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms