Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 AC027514.1-201ENST00000588561 1603 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 MTCO1P14-201ENST00000441695 1559 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 RNU6-661P-201ENST00000362409 107 ntBASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 BTBD10P2-201ENST00000404779 676 ntBASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 ATP5F1P1-201ENST00000433775 569 ntBASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 AC108479.2-201ENST00000617314 601 ntBASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 AC010733.2-201ENST00000589496 5702 ntBASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHANK2Q9UPX8 U8.10-201ENST00000384260 133 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 MTCO3P21-201ENST00000430791 643 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AC129850.1-201ENST00000436203 508 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 CR769767.1-201ENST00000436337 346 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 CBWD4P-201ENST00000445695 655 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AC009961.3-201ENST00000449832 765 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 SNORD13-201ENST00000459299 104 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AC017007.3-201ENST00000479865 435 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AL163540.1-201ENST00000485382 386 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AL356575.1-201ENST00000603008 283 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 AC048347.1-201ENST00000624621 427 ntBASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
SHANK2Q9UPX8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 FAM35CP-201ENST00000554755 2470 ntBASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 AP1B1P2-201ENST00000416196 106 ntBASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 AC073310.1-201ENST00000423226 1033 ntBASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 CD24P2-201ENST00000565486 219 ntBASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SHANK2Q9UPX8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 RPS15AP12-201ENST00000419498 388 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 MTND4LP12-201ENST00000448237 295 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 AC027673.1-201ENST00000456245 405 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 HMGB1P1-201ENST00000522557 636 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 AC110588.1-201ENST00000559699 137 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 MIR4255-201ENST00000579351 72 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 ABI1P1-201ENST00000603375 1120 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 AC244517.12-201ENST00000623581 663 ntBASIC3.01□□□□□ -1.93
SHANK2Q9UPX8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHANK2Q9UPX8 Y_RNA.224-201ENST00000364308 111 ntBASIC3□□□□□ -1.93
SHANK2Q9UPX8 AF274854.1-201ENST00000413236 615 ntBASIC3□□□□□ -1.93
SHANK2Q9UPX8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3□□□□□ -1.93
SHANK2Q9UPX8 RPL23AP76-201ENST00000441860 458 ntBASIC3□□□□□ -1.93
SHANK2Q9UPX8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3□□□□□ -1.93
SHANK2Q9UPX8 AC025881.1-201ENST00000518851 512 ntBASIC3□□□□□ -1.93
SHANK2Q9UPX8 SNORA4-201ENST00000584302 138 ntBASIC3□□□□□ -1.93
SHANK2Q9UPX8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 USP9YP8-201ENST00000441913 500 ntBASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 MOB1AP2-201ENST00000446060 614 ntBASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 API5P2-201ENST00000397055 1498 ntBASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 SEPT7P7-201ENST00000420492 1301 ntBASIC2.99□□□□□ -1.93
SHANK2Q9UPX8 RNA5SP325-201ENST00000363756 130 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 MIR9-3-201ENST00000385084 90 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 RAD23BP2-201ENST00000416003 1207 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 MTCO3P30-201ENST00000426425 670 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 NEK4P1-201ENST00000433383 879 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC009237.8-201ENST00000445492 379 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC098583.1-201ENST00000480875 255 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 MIR449C-201ENST00000516047 92 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC068446.3-201ENST00000555285 382 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC020895.1-201ENST00000595362 272 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC091834.1-201ENST00000614543 472 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC092650.2-201ENST00000619984 902 ntBASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.98□□□□□ -1.93
SHANK2Q9UPX8 RNY1P14-201ENST00000384426 108 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 RNU4-62P-201ENST00000410125 130 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 EI24P1-201ENST00000416584 867 ntBASIC2.97□□□□□ -1.93
SHANK2Q9UPX8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms