Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC022106.2-201ENST00000620114 757 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC068880.5-201ENST00000624331 290 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC009093.8-201ENST00000641769 292 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 RNU6-767P-201ENST00000384132 107 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.500-201ENST00000384466 111 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 EI24P3-201ENST00000399046 1062 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.598-201ENST00000410480 95 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL353193.1-201ENST00000421444 268 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC018630.2-202ENST00000422992 927 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 Z82205.1-201ENST00000428456 297 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 HMGB1P45-201ENST00000435986 653 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL022238.1-201ENST00000442557 355 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 PLGLA-201ENST00000465668 449 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC139783.2-201ENST00000504847 1145 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC087808.1-201ENST00000520501 361 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 MIR4503-201ENST00000582187 83 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC008638.3-201ENST00000603341 463 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC136443.5-201ENST00000603741 370 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC107214.2-201ENST00000608204 634 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 AC090971.5-201ENST00000621102 293 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 C2orf27A-204ENST00000623058 969 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.11□□□□□ -1.91
NOTCH3Q9UM47 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RNU6-1085P-201ENST00000363576 107 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RNU6-707P-201ENST00000364647 95 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SNORD42.2-201ENST00000365570 69 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RNU6-331P-201ENST00000384724 107 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 PIGPP2-201ENST00000411569 458 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 OR9R1P-201ENST00000412200 877 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 PDCL2P1-201ENST00000419302 352 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 SNRPEP10-201ENST00000420249 274 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL358176.2-201ENST00000425769 204 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 DYNLL1P7-201ENST00000429273 258 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL831737.1-201ENST00000441288 271 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MTND6P13-201ENST00000443510 523 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC023598.1-201ENST00000472521 361 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RPL36AP51-201ENST00000487216 318 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC110792.1-201ENST00000491826 472 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 CDH12P2-201ENST00000504393 298 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC048346.1-201ENST00000510247 144 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC243972.3-201ENST00000539655 198 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC107954.1-201ENST00000565906 727 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AL390838.2-201ENST00000602394 274 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 7SK.7-201ENST00000603504 247 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AP005137.2-201ENST00000609238 400 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RMST_3.1-201ENST00000611651 109 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RMST_5.1-201ENST00000618704 126 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC138965.3-201ENST00000623875 498 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC091905.1-201ENST00000624400 311 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC116667.1-201ENST00000604855 2072 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 AC138915.3-201ENST00000562908 1389 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 FARSBP1-201ENST00000435808 1778 ntBASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOTCH3Q9UM47 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms