Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IGHVIII-44-202ENST00000636235 289 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 MTND5P31-201ENST00000419366 1374 ntBASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPC1L1Q9UHC9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AF127577.6-201ENST00000623352 2191 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC073264.1-201ENST00000411508 416 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 Z93242.1-201ENST00000427102 353 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC093151.1-201ENST00000427711 313 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AL109933.2-201ENST00000452651 260 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC048346.1-201ENST00000510247 144 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC136601.2-201ENST00000604356 474 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC008277.2-201ENST00000605196 797 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 AL512427.1-201ENST00000618593 349 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 PABPC1P7-201ENST00000413177 1513 ntBASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.7□□□□□ -1.82
NPC1L1Q9UHC9 SEPT7P7-201ENST00000420492 1301 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 ASNSP3-201ENST00000451989 1306 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 HSPE1P26-201ENST00000405341 275 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 SFR1P2-201ENST00000421841 730 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC008837.1-201ENST00000511513 412 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC016065.2-201ENST00000514530 444 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 IGHV3-76-201ENST00000522465 295 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 TMF1P1-201ENST00000576058 373 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC090666.1-201ENST00000578241 445 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 MIR4666A-201ENST00000580160 79 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AL020997.3-201ENST00000602843 359 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 U73479.1-201ENST00000618062 168 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AC068722.2-201ENST00000618734 544 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 AL355578.1-201ENST00000607405 1328 ntBASIC3.69□□□□□ -1.82
NPC1L1Q9UHC9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 RNU6-441P-201ENST00000384545 106 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 RPS4XP8-201ENST00000402039 771 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 RPP40P1-201ENST00000426762 456 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 RPL21P112-201ENST00000434403 463 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 RPS20P5-201ENST00000434808 360 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 GAPDHP39-201ENST00000481866 979 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC078918.1-201ENST00000498515 228 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 RNA5SP135-201ENST00000517019 125 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 snoZ278.1-201ENST00000517059 112 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 HMGN2P28-201ENST00000606102 262 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 VN1R7P-201ENST00000619242 903 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC084035.1-201ENST00000634543 607 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC138915.3-201ENST00000562908 1389 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 AC109315.1-201ENST00000584143 1347 ntBASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPC1L1Q9UHC9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 RPL9P7-201ENST00000330965 580 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 RNU6-115P-201ENST00000364310 107 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 RNU6-1000P-201ENST00000391066 106 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AC244098.2-201ENST00000422068 99 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AL035407.1-201ENST00000429211 571 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms