Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC105272.1-201ENST00000438604 198 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AL121871.1-201ENST00000443413 436 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AL034418.1-201ENST00000448675 860 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC133963.2-201ENST00000513686 578 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 MTCO1P47-201ENST00000523889 1271 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC004923.2-201ENST00000529649 369 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 LRRC37A5P-203ENST00000580181 585 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 MIR4444-1-201ENST00000581696 74 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 MIR4444-2-201ENST00000584390 74 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC135178.6-201ENST00000605314 398 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC092954.1-201ENST00000609121 445 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC107294.1-201ENST00000609524 467 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC106028.5-201ENST00000610332 395 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 VN1R74P-201ENST00000613259 503 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 OR8B1P-202ENST00000641132 1178 ntBASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3Q9UBI1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC008432.1-201ENST00000615912 1320 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 OR56A5-201ENST00000340110 738 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 SNORA1.3-201ENST00000384676 136 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 RPS4XP3-201ENST00000398541 413 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 MTATP6P31-201ENST00000406985 692 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 RNU2-52P-201ENST00000410680 190 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AL513331.1-201ENST00000411908 397 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 HMGB1P11-201ENST00000413899 637 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 MTCO3P12-201ENST00000416718 547 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AL160175.1-201ENST00000428124 247 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 RSL24D1P3-201ENST00000449255 495 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC104978.1-201ENST00000449387 391 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC108734.3-201ENST00000481241 1165 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC008494.2-201ENST00000514544 370 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 SNORD116-30-201ENST00000516468 85 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC025755.1-201ENST00000521306 278 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 COX6CP8-201ENST00000522620 226 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 MIR3944-201ENST00000581277 108 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 RPS15AP11-201ENST00000594193 385 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC008739.2-201ENST00000597006 317 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 AC093732.2-201ENST00000607950 274 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 MIR8057-201ENST00000620957 69 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 SGO1P2-201ENST00000429458 1589 ntBASIC1.93□□□□□ -2.1
COMMD3Q9UBI1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 HSPE1P11-201ENST00000339579 310 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 MIR524-201ENST00000385242 87 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 SNORA48.7-201ENST00000391302 135 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 RPL7P37-201ENST00000425095 738 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC044797.1-201ENST00000445744 679 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AL358232.1-201ENST00000448030 501 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 NANOGNBP1-201ENST00000448444 480 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC025768.1-201ENST00000510057 267 ntBASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.92□□□□□ -2.1
COMMD3Q9UBI1 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms