Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RPL26P27-201ENST00000414397 437 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 DPH3P2-201ENST00000422618 250 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC115283.1-201ENST00000427353 400 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AL159987.2-201ENST00000432754 307 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AL353997.1-201ENST00000432936 108 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AL356981.1-201ENST00000454879 684 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC084357.1-201ENST00000473404 255 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 RN7SL187P-201ENST00000495587 303 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC093852.1-201ENST00000503587 266 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC091144.1-201ENST00000519573 138 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC090281.1-201ENST00000523019 276 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 OR7E161P-201ENST00000533722 967 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AC092032.1-201ENST00000603090 165 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 AL512329.1-201ENST00000404600 1592 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 DEFB109C-201ENST00000382575 264 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 DEFB109B-201ENST00000382656 264 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 RNU6-217P-201ENST00000384164 104 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 RN7SKP100-201ENST00000411258 284 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 HMGB3P2-201ENST00000411913 584 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 TMEM167AP1-201ENST00000423409 219 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC134879.1-201ENST00000426062 394 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC092573.2-201ENST00000434546 243 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 RPL7AP6-201ENST00000477943 801 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 NDUFB4P9-201ENST00000511646 388 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 RNU6-120P-201ENST00000516077 103 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 COX6CP5-201ENST00000527162 228 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 MIR4503-201ENST00000582187 83 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 SNORA16A-202ENST00000628458 135 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 BRAFP1-201ENST00000445336 2703 ntBASIC7.43□□□□□ -1.22
RTN4Q9NQC3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RTN4Q9NQC3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 Y_RNA.47-201ENST00000362697 108 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 RNU6-99P-201ENST00000364721 107 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 RN7SKP177-201ENST00000410567 355 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 SNX18P13-201ENST00000412442 529 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 HMGN2P30-201ENST00000423237 256 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 PPIL1P1-201ENST00000423936 499 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 PFN1P11-201ENST00000445829 389 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 GOT2P2-201ENST00000450663 1251 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 RNU2-58P-201ENST00000516403 183 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC005476.1-201ENST00000554427 397 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC104695.3-201ENST00000604052 296 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC011626.1-201ENST00000604710 562 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC100812.1-201ENST00000607622 580 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 FTX_3.1-201ENST00000610451 147 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AL592182.3-201ENST00000642132 3304 ntBASIC7.42□□□□□ -1.22
RTN4Q9NQC3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC7.42□□□□□ -1.22
RTN4Q9NQC3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms