Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC068339.2-201ENST00000534395 618 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC124283.4-201ENST00000581815 456 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 GLUD1P4-201ENST00000590914 418 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC002487.1-201ENST00000604565 994 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 NUTF2P8-201ENST00000604593 363 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC008083.4-201ENST00000615076 444 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 BX649567.1-201ENST00000642071 1134 ntBASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
TM9SF3Q9HD45 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 RNU6-7-201ENST00000364784 107 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 RNU6-8-201ENST00000365467 107 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 SNORA7.4-201ENST00000384249 137 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 SNORD51-201ENST00000384320 80 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 SNORD116-23-201ENST00000384645 92 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 SDCBPP3-201ENST00000419629 891 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AL137014.1-201ENST00000420490 1226 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 RPL23AP58-201ENST00000440453 469 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 ST13P14-201ENST00000474095 734 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 POU5F1P7-201ENST00000508759 541 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 PSMA2P1-201ENST00000526365 646 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC008127.2-201ENST00000549925 1075 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC012443.1-201ENST00000605605 231 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AL353748.2-201ENST00000622148 471 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 CYP3A51P-201ENST00000633513 256 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
TM9SF3Q9HD45 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 RNU6-582P-201ENST00000362989 107 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 RNU6-549P-201ENST00000384433 107 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 RPL22P22-201ENST00000395439 379 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 RNU2-15P-201ENST00000410692 191 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 FCF1P2-201ENST00000415284 583 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 RPL31P54-201ENST00000429803 370 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 SETP8-201ENST00000435341 628 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AP000949.1-201ENST00000438328 629 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 MTCO1P48-201ENST00000448024 1096 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 OR51B8P-201ENST00000449892 769 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 NAMPTP2-201ENST00000505629 1115 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AC079089.3-201ENST00000603094 673 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AL033523.1-201ENST00000605153 153 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 AL137790.1-201ENST00000634283 177 ntBASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF3Q9HD45 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
TM9SF3Q9HD45 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.15□□□□□ -1.9
TM9SF3Q9HD45 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 RNU6-932P-201ENST00000391108 106 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 RNA5SP252-201ENST00000391131 119 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AC006960.1-201ENST00000419980 153 ntBASIC3.15□□□□□ -1.91
TM9SF3Q9HD45 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms