Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC007485.1-201ENST00000616755 206 ntBASIC5.96□□□□□ -1.46
EFCC1Q9HA90 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 DHX40P1-201ENST00000588725 1412 ntBASIC5.96□□□□□ -1.46
EFCC1Q9HA90 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 AL034549.2-201ENST00000618285 3373 ntBASIC5.96□□□□□ -1.46
EFCC1Q9HA90 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 ZNF807-201ENST00000328088 1707 ntBASIC5.96□□□□□ -1.46
EFCC1Q9HA90 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EFCC1Q9HA90 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 Y_RNA.112-201ENST00000363250 102 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 Y_RNA.176-201ENST00000363815 109 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 DSTNP4-201ENST00000399472 474 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 MIR1271-201ENST00000408537 86 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 OR6C66P-201ENST00000414917 930 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 RPL31P45-201ENST00000419532 356 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 TIMM9P1-201ENST00000436122 256 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 LINC02210-201ENST00000444561 288 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AL035666.1-201ENST00000446195 348 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC104308.1-201ENST00000454621 333 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 RNU7-182P-201ENST00000459009 62 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 RNU7-66P-201ENST00000459469 62 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AP005435.4-201ENST00000529514 284 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AP000889.2-201ENST00000532684 490 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 MYL12BP1-201ENST00000569826 507 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AL592436.1-201ENST00000605135 558 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AL162373.1-201ENST00000620433 407 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC004972.1-201ENST00000623934 2209 ntBASIC5.95□□□□□ -1.46
EFCC1Q9HA90 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EFCC1Q9HA90 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 Y_RNA.22-201ENST00000362492 102 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 RNU6-1029P-201ENST00000384109 107 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AL603908.1-201ENST00000406098 201 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 RNA5SP113-201ENST00000410486 84 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 RNU2-47P-201ENST00000410649 186 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 MCFD2P1-201ENST00000417812 300 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC073465.2-201ENST00000440938 498 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC022431.1-201ENST00000450941 438 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC079168.1-201ENST00000458741 345 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 RN7SKP21-201ENST00000516503 220 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC008782.1-201ENST00000603386 430 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 AL157817.1-201ENST00000614264 790 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 MIR6830-201ENST00000636015 70 ntBASIC5.94□□□□□ -1.46
EFCC1Q9HA90 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
EFCC1Q9HA90 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms