Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL022099.1-201ENST00000604551 712 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AC009902.3-201ENST00000606235 2172 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AC015914.2-201ENST00000618167 288 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AC068870.2-201ENST00000620635 389 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 uc_338.22-201ENST00000622722 187 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AP002799.1-201ENST00000623552 423 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AL596275.2-204ENST00000641628 552 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AL596275.2-206ENST00000641957 626 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AC009313.2-201ENST00000417893 1941 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 AC027290.2-201ENST00000623210 18662 ntBASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SEC61A2Q9H9S3 SAMMSON-213ENST00000641336 1521 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 THAP12P4-201ENST00000528321 2266 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 HSPE1P11-201ENST00000339579 310 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 RNA5SP123-201ENST00000363244 119 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 SNORD82-201ENST00000365530 70 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.378-201ENST00000365652 113 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.395-201ENST00000383945 109 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.530-201ENST00000384587 101 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 MIR19A-201ENST00000384878 82 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 RNU6-907P-201ENST00000390924 102 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 CISD1P1-201ENST00000393907 327 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL109941.1-201ENST00000401925 229 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL358176.3-201ENST00000420757 454 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 CHIAP3-201ENST00000423668 1133 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL358176.2-201ENST00000425769 204 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL031736.2-201ENST00000426573 787 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 FHP1-201ENST00000442741 703 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 KNOP1P3-201ENST00000446933 426 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL356981.1-201ENST00000454879 684 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL162395.1-201ENST00000457882 422 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 RNU7-66P-201ENST00000459469 62 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 RN7SL329P-201ENST00000467740 299 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC126389.1-201ENST00000477436 290 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 COX6B1P5-201ENST00000509843 249 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 PTP4A1P4-201ENST00000512479 322 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL671862.1-201ENST00000515851 349 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 Y_RNA.720-201ENST00000517166 92 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 COX6CP5-201ENST00000527162 228 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC018630.1-201ENST00000541376 925 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 SNRPGP18-201ENST00000553000 214 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 OR1F2P-201ENST00000570470 933 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 MIR5583-1-201ENST00000580941 59 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL512782.1-201ENST00000603093 364 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC024940.4-201ENST00000605507 246 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC092807.2-201ENST00000609367 243 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AL596245.1-201ENST00000618994 362 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 AC244100.1-202ENST00000621554 382 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 TAB3P1-202ENST00000452645 1634 ntBASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SEC61A2Q9H9S3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SEC61A2Q9H9S3 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
SEC61A2Q9H9S3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.4□□□□□ -1.7
SEC61A2Q9H9S3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNU4-44P-201ENST00000363050 141 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 U3.11-201ENST00000364476 212 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RNA5SP428-201ENST00000365129 132 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 UBE2V1P2-201ENST00000397758 440 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 MIR548K-201ENST00000408406 116 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 RPL37P10-201ENST00000412884 288 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 OR6C66P-201ENST00000414917 930 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC068533.1-201ENST00000418542 415 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC009965.2-201ENST00000425328 970 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AL590762.4-201ENST00000425885 253 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 FTLP19-201ENST00000433300 394 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AL359265.2-201ENST00000434367 631 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC108059.2-201ENST00000434626 151 ntBASIC4.4□□□□□ -1.71
SEC61A2Q9H9S3 AC005019.1-201ENST00000436455 431 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms