Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC005297.2-201ENST00000450430 606 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RNU6-329P-201ENST00000459618 107 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RPL38P4-201ENST00000502376 214 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RNU1-6P-201ENST00000516290 144 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.691-201ENST00000516611 103 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RAB9BP1-201ENST00000519581 626 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC093012.1-202ENST00000549403 582 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 RN7SL652P-201ENST00000577769 300 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 MIR4458-201ENST00000578872 75 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC098848.2-201ENST00000588023 330 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC008737.2-201ENST00000599446 118 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC004853.1-201ENST00000604902 698 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC021646.1-201ENST00000605469 484 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AL355472.4-201ENST00000610233 626 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 MIR378J-201ENST00000611988 109 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 DDX18P3-201ENST00000404856 2007 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 ZNF33CP-201ENST00000432492 2030 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
RNF38Q9H0F5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF38Q9H0F5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 SNORD113.2-201ENST00000364166 89 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.255-201ENST00000364581 97 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 Y_RNA.459-201ENST00000384251 102 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AL645937.1-202ENST00000421799 937 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 SRIP2-201ENST00000428470 166 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 snoU13.1-201ENST00000459157 104 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 HMGN2P26-201ENST00000463169 339 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AC022034.3-201ENST00000471393 478 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 RN7SL481P-201ENST00000477764 299 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 SCARNA24.1-201ENST00000516465 137 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 FRG2DP-202ENST00000566967 323 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 RPL23AP92-201ENST00000603609 255 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AC010591.1-201ENST00000603941 649 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AC106900.2-201ENST00000604994 317 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AL133216.2-202ENST00000634512 349 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 MTND4LP32-201ENST00000636111 270 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 AC073869.10-201ENST00000642016 354 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 MAPK10-263ENST00000641052 4307 ntBASIC4.94□□□□□ -1.62
RNF38Q9H0F5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNF38Q9H0F5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 RNU6-1097P-201ENST00000363586 107 ntBASIC4.93□□□□□ -1.62
RNF38Q9H0F5 RNVU1-3-201ENST00000364313 161 ntBASIC4.93□□□□□ -1.62
RNF38Q9H0F5 RNU6-996P-201ENST00000365438 107 ntBASIC4.93□□□□□ -1.62
RNF38Q9H0F5 SNORD82-201ENST00000365530 70 ntBASIC4.93□□□□□ -1.62
RNF38Q9H0F5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF38Q9H0F5 AL583835.1-201ENST00000399570 407 ntBASIC4.93□□□□□ -1.62
RNF38Q9H0F5 AL591848.1-201ENST00000413092 322 ntBASIC4.93□□□□□ -1.62
RNF38Q9H0F5 AC140479.3-201ENST00000418944 1126 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms