Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 OR10V3P-201ENST00000525712 725 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC133794.1-201ENST00000602731 914 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 DUXAP4-201ENST00000603046 613 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC096947.1-201ENST00000603233 470 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AP000787.2-201ENST00000604432 568 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC100793.4-201ENST00000613683 429 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC020658.4-201ENST00000613987 684 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC003001.2-201ENST00000616294 831 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AC006249.1-201ENST00000621223 471 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 AL590396.4-201ENST00000636779 956 ntBASIC2.1□□□□□ -2.07
UPK3BQ9BT76 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.1□□□□□ -2.07
UPK3BQ9BT76 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 GNG5P1-201ENST00000255500 204 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RNU6-792P-201ENST00000363490 107 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RNU6-173P-201ENST00000364215 104 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RNU1-109P-201ENST00000383960 147 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RNU6-1027P-201ENST00000383998 107 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RNU6-481P-201ENST00000384194 107 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 SNORA54-201ENST00000384281 123 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 SNORA1.3-201ENST00000384676 136 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AP002784.2-201ENST00000397300 549 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RPS4XP3-201ENST00000398541 413 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 MTCO2P31-201ENST00000402702 684 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RPS15AP38-201ENST00000413110 372 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AL121882.1-201ENST00000422893 417 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RPL31P54-201ENST00000429803 370 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RPS12P18-201ENST00000442381 270 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 OR6K5P-201ENST00000447050 945 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 MTND2P30-201ENST00000456663 382 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RPS27AP9-201ENST00000477681 438 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 RPL21P131-201ENST00000497298 483 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC083906.5-201ENST00000503722 328 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC006390.1-201ENST00000508068 283 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 CBX3P3-201ENST00000508108 532 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC118282.2-201ENST00000508739 374 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC048346.1-201ENST00000510247 144 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC025881.1-201ENST00000518851 512 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC113192.3-201ENST00000529152 742 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 MED28P6-201ENST00000558776 231 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AADACP1-206ENST00000561502 1193 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 VN1R92P-201ENST00000598511 928 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AP000676.4-201ENST00000624659 623 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 BX649567.1-201ENST00000642071 1134 ntBASIC2.09□□□□□ -2.07
UPK3BQ9BT76 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UPK3BQ9BT76 AC011460.1-201ENST00000636268 1834 ntBASIC2.09□□□□□ -2.08
UPK3BQ9BT76 AC096644.4-201ENST00000563417 2912 ntBASIC2.09□□□□□ -2.08
UPK3BQ9BT76 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.09□□□□□ -2.08
UPK3BQ9BT76 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 RNU5D-1-201ENST00000363299 116 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 RNU6-799P-201ENST00000363567 107 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 U3.29-201ENST00000391296 212 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC110754.1-201ENST00000399740 601 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AL024474.1-201ENST00000404655 591 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 TMEM167AP1-201ENST00000423409 219 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 RPL35AP12-201ENST00000425362 338 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC005345.1-201ENST00000431868 217 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC234064.1-201ENST00000436312 247 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AL589880.1-201ENST00000448271 287 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC112492.1-201ENST00000449607 712 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AL031183.1-201ENST00000457667 207 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC084024.2-201ENST00000503480 791 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC097462.2-201ENST00000504623 481 ntBASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.08□□□□□ -2.08
UPK3BQ9BT76 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms