Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.37□□□□□ -1.71
SMOQ99835 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SMOQ99835 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMOQ99835 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMOQ99835 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMOQ99835 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SMOQ99835 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SMOQ99835 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.37□□□□□ -1.71
SMOQ99835 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
SMOQ99835 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.36□□□□□ -1.71
SMOQ99835 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.36□□□□□ -1.71
SMOQ99835 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 MIR372-201ENST00000362225 67 ntBASIC4.36□□□□□ -1.71
SMOQ99835 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SMOQ99835 U3.29-201ENST00000391296 212 ntBASIC4.36□□□□□ -1.71
SMOQ99835 MTND4LP20-201ENST00000402379 270 ntBASIC4.36□□□□□ -1.71
SMOQ99835 RNU2-15P-201ENST00000410692 191 ntBASIC4.36□□□□□ -1.71
SMOQ99835 RNU2-8P-201ENST00000410727 190 ntBASIC4.36□□□□□ -1.71
SMOQ99835 CCDC58P2-201ENST00000417131 366 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AL109913.1-201ENST00000421173 514 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC092832.1-201ENST00000422934 400 ntBASIC4.36□□□□□ -1.71
SMOQ99835 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SMOQ99835 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.36□□□□□ -1.71
SMOQ99835 RPL23AP89-201ENST00000439324 255 ntBASIC4.36□□□□□ -1.71
SMOQ99835 MTND2P24-201ENST00000453434 806 ntBASIC4.36□□□□□ -1.71
SMOQ99835 MTND1P12-201ENST00000455231 147 ntBASIC4.36□□□□□ -1.71
SMOQ99835 FCF1P3-201ENST00000496394 590 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC074344.1-201ENST00000512823 224 ntBASIC4.36□□□□□ -1.71
SMOQ99835 NPM1P41-201ENST00000512920 831 ntBASIC4.36□□□□□ -1.71
SMOQ99835 Vault.3-201ENST00000516676 95 ntBASIC4.36□□□□□ -1.71
SMOQ99835 IGKV2D-36-201ENST00000518643 226 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.36□□□□□ -1.71
SMOQ99835 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.36□□□□□ -1.71
SMOQ99835 AL121579.1-201ENST00000555129 305 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.36□□□□□ -1.71
SMOQ99835 AL356432.3-201ENST00000568952 465 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC099489.2-201ENST00000574976 260 ntBASIC4.36□□□□□ -1.71
SMOQ99835 MIR3160-1-201ENST00000577972 85 ntBASIC4.36□□□□□ -1.71
SMOQ99835 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.36□□□□□ -1.71
SMOQ99835 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.36□□□□□ -1.71
SMOQ99835 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.36□□□□□ -1.71
SMOQ99835 AC008277.2-201ENST00000605196 797 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC121334.2-201ENST00000605387 271 ntBASIC4.36□□□□□ -1.71
SMOQ99835 SNX18P1Y-201ENST00000616231 511 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC112484.5-201ENST00000624189 228 ntBASIC4.36□□□□□ -1.71
SMOQ99835 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SMOQ99835 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SMOQ99835 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SMOQ99835 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SMOQ99835 AL359893.1-201ENST00000447628 1580 ntBASIC4.36□□□□□ -1.71
SMOQ99835 AC091046.3-201ENST00000631455 1574 ntBASIC4.36□□□□□ -1.71
SMOQ99835 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMOQ99835 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMOQ99835 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMOQ99835 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 RNU6-97P-201ENST00000363387 104 ntBASIC4.35□□□□□ -1.71
SMOQ99835 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.35□□□□□ -1.71
SMOQ99835 AC108032.1-201ENST00000416706 207 ntBASIC4.35□□□□□ -1.71
SMOQ99835 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.35□□□□□ -1.71
SMOQ99835 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.35□□□□□ -1.71
SMOQ99835 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.35□□□□□ -1.71
SMOQ99835 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.35□□□□□ -1.71
SMOQ99835 RPS20P1-201ENST00000434853 354 ntBASIC4.35□□□□□ -1.71
SMOQ99835 HMGB3P21-201ENST00000452483 547 ntBASIC4.35□□□□□ -1.71
SMOQ99835 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 AC104308.1-201ENST00000454621 333 ntBASIC4.35□□□□□ -1.71
SMOQ99835 RPS4XP10-201ENST00000465034 731 ntBASIC4.35□□□□□ -1.71
SMOQ99835 OR5H5P-201ENST00000503164 928 ntBASIC4.35□□□□□ -1.71
SMOQ99835 AC010587.1-201ENST00000505809 469 ntBASIC4.35□□□□□ -1.71
SMOQ99835 AC005798.1-201ENST00000513715 387 ntBASIC4.35□□□□□ -1.71
SMOQ99835 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 AP003497.1-201ENST00000528472 562 ntBASIC4.35□□□□□ -1.71
SMOQ99835 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
SMOQ99835 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.35□□□□□ -1.71
SMOQ99835 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.35□□□□□ -1.71
SMOQ99835 AC006338.1-201ENST00000618453 749 ntBASIC4.35□□□□□ -1.71
SMOQ99835 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SMOQ99835 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMOQ99835 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SMOQ99835 RLIMP1-201ENST00000339626 1680 ntBASIC4.35□□□□□ -1.71
SMOQ99835 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMOQ99835 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SMOQ99835 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms