Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AF279873.1-201ENST00000523393 313 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CDX2Q99626 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.83□□□□□ -1.96
CDX2Q99626 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX2Q99626 MIR1273D-201ENST00000577266 86 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 MIR4781-201ENST00000585250 76 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 NRBF2P1-201ENST00000587407 859 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX2Q99626 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDX2Q99626 AP000942.3-201ENST00000603702 160 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDX2Q99626 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 MIR8084-201ENST00000614105 89 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 MTCO1P6-201ENST00000481192 1384 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 MTND4P34-201ENST00000572715 1371 ntBASIC2.83□□□□□ -1.96
CDX2Q99626 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CDX2Q99626 TAB3P1-202ENST00000452645 1634 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AP003122.5-201ENST00000527668 3766 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDX2Q99626 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX2Q99626 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDX2Q99626 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX2Q99626 SNORA51.2-201ENST00000364595 132 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AC241520.1-201ENST00000422654 1099 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX2Q99626 AL009174.1-201ENST00000426577 416 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.82□□□□□ -1.96
CDX2Q99626 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.82□□□□□ -1.96
CDX2Q99626 HMGN2P20-201ENST00000437531 273 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 HIGD1AP11-201ENST00000438361 280 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AC104308.1-201ENST00000454621 333 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AL590639.1-201ENST00000456484 337 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AC078857.1-201ENST00000469870 667 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 RPL36AP21-201ENST00000490372 323 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AC116337.1-201ENST00000509680 687 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX2Q99626 RNA5SP320-201ENST00000516263 124 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AP001636.2-201ENST00000525517 696 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.82□□□□□ -1.96
CDX2Q99626 AC005951.1-201ENST00000576706 485 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDX2Q99626 MIR4474-201ENST00000579189 78 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 VN1R88P-201ENST00000596787 292 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 AC009039.2-201ENST00000624524 529 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX2Q99626 MTCO1P4-201ENST00000520516 1409 ntBASIC2.82□□□□□ -1.96
CDX2Q99626 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDX2Q99626 SNORD62.1-201ENST00000362541 86 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 RNU6-609P-201ENST00000365459 107 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 RNU6-481P-201ENST00000384194 107 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDX2Q99626 MORF4L1P6-201ENST00000418771 268 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 CKS1BP5-201ENST00000434172 273 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDX2Q99626 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.81□□□□□ -1.96
CDX2Q99626 UBE2V1P5-201ENST00000440070 405 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDX2Q99626 BX248409.1-201ENST00000455497 255 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 GTF2IP12-201ENST00000456547 356 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 AC091179.1-201ENST00000461606 579 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 ST13P14-201ENST00000474095 734 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.81□□□□□ -1.96
CDX2Q99626 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.81□□□□□ -1.96
CDX2Q99626 RN7SL636P-201ENST00000497504 294 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 RPL23AP55-201ENST00000498163 452 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDX2Q99626 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.81□□□□□ -1.96
CDX2Q99626 AC027338.1-201ENST00000514840 825 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 FABP5P12-201ENST00000515543 389 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 AC018630.1-201ENST00000541376 925 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.81□□□□□ -1.96
CDX2Q99626 AC004217.3-201ENST00000551552 878 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.81□□□□□ -1.96
CDX2Q99626 AC095057.3-201ENST00000567102 1157 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 MIR3908-201ENST00000579798 126 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 RN7SL622P-201ENST00000585292 275 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.81□□□□□ -1.96
CDX2Q99626 AC091488.1-201ENST00000604239 660 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 BNIP3P4-201ENST00000604946 565 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 AC073476.4-201ENST00000628409 72 ntBASIC2.81□□□□□ -1.96
CDX2Q99626 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX2Q99626 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX2Q99626 AC104454.1-201ENST00000421341 1401 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 AC016716.1-201ENST00000265882 708 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 RNU6-1243P-201ENST00000364028 107 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDX2Q99626 BTBD10P2-201ENST00000404779 676 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 MTATP6P11-201ENST00000428071 670 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.8□□□□□ -1.96
CDX2Q99626 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX2Q99626 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX2Q99626 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX2Q99626 RPL23AP33-201ENST00000442301 452 ntBASIC2.8□□□□□ -1.96
CDX2Q99626 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.8□□□□□ -1.96
CDX2Q99626 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX2Q99626 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.8□□□□□ -1.96
CDX2Q99626 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms