Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.67□□□□□ -1.98
VAT1Q99536 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.67□□□□□ -1.98
VAT1Q99536 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.67□□□□□ -1.98
VAT1Q99536 AC023824.3-201ENST00000569003 562 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AC090666.1-201ENST00000578241 445 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
VAT1Q99536 AC005000.2-201ENST00000605468 310 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AC006329.2-201ENST00000611491 394 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.67□□□□□ -1.98
VAT1Q99536 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.67□□□□□ -1.98
VAT1Q99536 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VAT1Q99536 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
VAT1Q99536 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.67□□□□□ -1.98
VAT1Q99536 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.67□□□□□ -1.98
VAT1Q99536 AC111188.2-201ENST00000529697 1387 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VAT1Q99536 RNU6-859P-201ENST00000362728 107 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AC096664.2-201ENST00000411843 406 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 SNRPEP4-201ENST00000435815 279 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.66□□□□□ -1.98
VAT1Q99536 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 MTND2P3-201ENST00000452458 470 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.66□□□□□ -1.98
VAT1Q99536 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.66□□□□□ -1.98
VAT1Q99536 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AC006445.2-201ENST00000510061 472 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.66□□□□□ -1.98
VAT1Q99536 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.66□□□□□ -1.98
VAT1Q99536 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.66□□□□□ -1.98
VAT1Q99536 AP000790.1-201ENST00000528891 737 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AC124293.1-201ENST00000530034 493 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 SNRPGP16-201ENST00000533275 226 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 OR7K1P-201ENST00000546439 926 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AC123904.3-201ENST00000547218 814 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 MIR3200-201ENST00000580767 85 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 OR4H6P-202ENST00000603819 340 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 AP001330.4-201ENST00000604350 154 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 ATP1B3P1-201ENST00000605365 821 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
VAT1Q99536 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.66□□□□□ -1.98
VAT1Q99536 AC132825.7-201ENST00000638744 335 ntBASIC2.66□□□□□ -1.98
VAT1Q99536 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VAT1Q99536 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
VAT1Q99536 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
VAT1Q99536 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VAT1Q99536 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VAT1Q99536 OR5J1P-201ENST00000313544 939 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 RPS3AP26-201ENST00000398259 784 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AL356057.3-201ENST00000402607 340 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.65□□□□□ -1.99
VAT1Q99536 OR51A3P-201ENST00000413596 924 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.65□□□□□ -1.99
VAT1Q99536 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.65□□□□□ -1.99
VAT1Q99536 USP9YP36-201ENST00000424581 829 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.65□□□□□ -1.99
VAT1Q99536 AL645638.1-201ENST00000440519 361 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.65□□□□□ -1.99
VAT1Q99536 RPL23AP20-201ENST00000447965 421 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VAT1Q99536 AC011352.3-201ENST00000505162 593 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AC034159.1-201ENST00000513885 583 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.65□□□□□ -1.99
VAT1Q99536 ERHP1-201ENST00000523006 310 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.65□□□□□ -1.99
VAT1Q99536 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.65□□□□□ -1.99
VAT1Q99536 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
VAT1Q99536 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.65□□□□□ -1.99
VAT1Q99536 SNORD39.3-201ENST00000584451 71 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 BNIP3P22-201ENST00000593399 556 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 KATNBL1P5-201ENST00000605015 517 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.65□□□□□ -1.99
VAT1Q99536 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VAT1Q99536 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.65□□□□□ -1.99
VAT1Q99536 AC040168.1-201ENST00000623594 991 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.65□□□□□ -1.99
VAT1Q99536 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.65□□□□□ -1.99
VAT1Q99536 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.65□□□□□ -1.99
VAT1Q99536 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VAT1Q99536 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.65□□□□□ -1.99
VAT1Q99536 AP002907.1-201ENST00000606361 1430 ntBASIC2.65□□□□□ -1.99
VAT1Q99536 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VAT1Q99536 AC092447.7-201ENST00000422212 1621 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VAT1Q99536 AP000526.1-201ENST00000603308 1388 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
VAT1Q99536 SNORA14A-201ENST00000364773 135 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 RNU6-7-201ENST00000364784 107 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 RNU6-8-201ENST00000365467 107 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.64□□□□□ -1.99
VAT1Q99536 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VAT1Q99536 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VAT1Q99536 SNORA11.1-201ENST00000408133 129 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.64□□□□□ -1.99
VAT1Q99536 RNA5SP492-201ENST00000411330 114 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AL445183.3-201ENST00000414168 502 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 USP9YP20-201ENST00000419224 558 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.64□□□□□ -1.99
VAT1Q99536 RPL7P44-201ENST00000424827 742 ntBASIC2.64□□□□□ -1.99
VAT1Q99536 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.64□□□□□ -1.99
VAT1Q99536 RPL23AP83-201ENST00000434984 473 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms