Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 Y_RNA.702-201ENST00000516843 96 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX18Q96RF0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AL157687.1-201ENST00000554853 619 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC025678.1-201ENST00000567861 338 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC005730.3-201ENST00000583067 366 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC091135.1-201ENST00000585943 307 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 RPL12P25-202ENST00000598100 674 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC010201.1-201ENST00000605051 540 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC139792.3-201ENST00000623525 224 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 AC091953.2-201ENST00000623979 160 ntBASIC4.07□□□□□ -1.76
SNX18Q96RF0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNX18Q96RF0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX18Q96RF0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 MFSD8-242ENST00000641690 4199 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL359893.1-201ENST00000447628 1580 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 CASC19-280ENST00000642102 1351 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL590240.1-201ENST00000334118 313 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 RNA5SP332-201ENST00000391063 115 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 U3.29-201ENST00000391296 212 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 RN7SKP235-201ENST00000410662 305 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 RN7SKP106-201ENST00000410832 272 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC127526.1-201ENST00000417526 366 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 HMGB3P20-201ENST00000417997 600 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 ZNF863P-201ENST00000426746 417 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC092017.2-201ENST00000427600 362 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 COX7A2P2-201ENST00000505291 250 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC010587.1-201ENST00000505809 469 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC111000.3-201ENST00000508057 576 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC117522.1-201ENST00000509821 380 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC114781.4-201ENST00000513707 639 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 RN7SKP234-201ENST00000517173 224 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 ADI1P3-201ENST00000549509 470 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 SUB1P2-201ENST00000556401 297 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL356432.3-201ENST00000568952 465 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AL355472.4-201ENST00000610233 626 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC063943.3-201ENST00000615562 356 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 AC079597.1-201ENST00000624306 508 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 MIR1321-201ENST00000637766 79 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 CPHL1P-201ENST00000461341 3407 ntBASIC4.06□□□□□ -1.76
SNX18Q96RF0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX18Q96RF0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX18Q96RF0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 MTND5P33-201ENST00000571250 1450 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX18Q96RF0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX18Q96RF0 RNA5SP307-201ENST00000362863 116 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 RNA5SP322-201ENST00000363617 119 ntBASIC4.05□□□□□ -1.76
SNX18Q96RF0 RNU6-339P-201ENST00000384310 107 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms