Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL669831.3-213ENST00000636676 183 ntBASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 AC009962.1-201ENST00000567327 3813 ntBASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
CCDC85AQ96PX6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 Y_RNA.252-201ENST00000364556 101 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 SNORA75B-201ENST00000384053 137 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 RNU6-1222P-201ENST00000384615 107 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 HMGB3P2-201ENST00000411913 584 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC069213.2-201ENST00000420238 366 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC096644.2-201ENST00000429278 159 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 RPS29P22-201ENST00000472363 168 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC108043.1-201ENST00000512696 574 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 RNU6-189P-201ENST00000516120 101 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC135001.1-201ENST00000544546 283 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 TVP23CP2-201ENST00000571473 623 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AL669831.4-202ENST00000590817 238 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC005191.1-201ENST00000603950 358 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC004696.1-201ENST00000614345 607 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC010378.1-201ENST00000619270 362 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 AC107027.3-201ENST00000565095 3473 ntBASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC85AQ96PX6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SAMMSON-226ENST00000642089 1582 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC004158.1-201ENST00000564508 4319 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SNORD3E-201ENST00000362899 217 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 Y_RNA.80-201ENST00000362996 102 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RNU6-1243P-201ENST00000364028 107 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RNVU1-6-201ENST00000364688 164 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RNA5SP87-201ENST00000384155 118 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 Y_RNA.556-201ENST00000384677 113 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RNU6-328P-201ENST00000390887 106 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SNORA68.2-201ENST00000391263 128 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SOD2P1-201ENST00000396543 562 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SNORA77-201ENST00000408716 125 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 Y_RNA.646-201ENST00000410980 101 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 PDSS1P1-201ENST00000422953 1114 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RPL7AP49-201ENST00000429522 581 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 EZH2P1-201ENST00000431167 291 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AL591438.1-201ENST00000433508 581 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RPL23AP89-201ENST00000439324 255 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RPL7L1P1-201ENST00000448259 785 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RN7SL860P-201ENST00000473738 223 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC097473.1-201ENST00000508142 408 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.27□□□□□ -1.41
CCDC85AQ96PX6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms